| New model in OGS2.0 | DPOGS212646 |
|---|---|
| Genomic Position | scaffold1301:- 18574-40190 |
| See gene structure | |
| CDS Length | 810 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 76 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013948 (2e-50) |
| Best Drosophila hit | orthopedia, isoform C (4e-38) |
| Best Human hit | homeobox protein orthopedia (4e-29) |
| Best NR hit (blastp) | orthopedia [Tribolium castaneum] (5e-74) |
| Best NR hit (blastx) | orthopedia [Tribolium castaneum] (2e-68) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0045449 regulation of transcription GO:0007417 central nervous system development GO:0007379 segment specification GO:0003704 specific RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR000047 Helix-turn-helix motif, lambda-like repressor IPR001356 Homeobox IPR017970 Homeobox, conserved site IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
| Orthology group | MCL15578 |
Nucleotide sequence:
ATGCTTAACAACCTCACTACGGCTCTAGGAGGTGGTATCCATCAGCAGCACAGCGGCCAT
ATGGCCACGGTACCAGTCAGCATGTCCTCATCCACGTCAGACAGCGACAAGCCAGCGAAA
CAGAAGAGACACAGAACGAGGTTTACACCGGCGCAGCTAAATGAGTTGGAGCGATGCTTC
ACTAAAACTCATTACCCAGATATATTCATGAGGGAGGAGATAGCCATGCGCATCGGACTG
ACGGAGAGTAGAGTACAGGTCTGGTTTCAAAACCGTCGAGCCAAATGGAAGAAACGTAAG
AAGAGCACTAATGTGTTTCGGTCCCCGGGAGCACTCCTGCCATCCCACGGTCTGCCGCCC
TTCGGAGCTGGTGATGTTTGCAGTCCCGGGGTGTTCGCTGATAGGCCTTGGTCTATGCCC
GCAGGTTTGGGCCAGCTGTCTCAAGGCGGGGTGGCGATGGGCGGCTTCGGCCAGCTGTCC
GAGCTGAACCCCGCCCTGCCCATCAGCTCGGTGGCTTCACAGCCTTATCAGTCACACTAT
CCGTTGAACACTCTCGGTGATACGATGATGTCTTATTGTAACAACATCAGCGGACAGCAG
CTGGAGGGGTCCGCGACGCCGACCCCACCACACGGGGGTCATTGTGGACCCAACAACGGA
TCACCCACCAACGGTGGCGCTGAGTGCGGTGAGGAGGAAGTGTGGCGCGGTCACAGCATC
GCGGCGCTCCGACGACGAGCCTCCGAGCTCTCGGCCGCTATACCGCCGTACTTACAACTC
AACTACGACGCGCACAGCCCCGTCTACTGA
Protein sequence:
MLNNLTTALGGGIHQQHSGHMATVPVSMSSSTSDSDKPAKQKRHRTRFTPAQLNELERCF
TKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKSTNVFRSPGALLPSHGLPP
FGAGDVCSPGVFADRPWSMPAGLGQLSQGGVAMGGFGQLSELNPALPISSVASQPYQSHY
PLNTLGDTMMSYCNNISGQQLEGSATPTPPHGGHCGPNNGSPTNGGAECGEEEVWRGHSI
AALRRRASELSAAIPPYLQLNYDAHSPVY