| New model in OGS2.0 | DPOGS201143 |
|---|---|
| Genomic Position | scaffold1000:- 82591-84248 |
| See gene structure | |
| CDS Length | 729 |
| Paired RNAseq reads | 41 |
| Single RNAseq reads | 138 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012973 (2e-23) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | reverse transcriptase [Daphnia pulex] (3e-22) |
| Best NR hit (blastx) | reverse transcriptase [Daphnia pulex] (5e-21) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL15204 |
Nucleotide sequence:
ATGCCACCCAATACTGAAAGTATCACCGATATTCCACAAAAACATACTGGAGGCTGGCAA
AATTTACATCGAGCTACAAAGAATACCTACGAGCTACCTAGTCCAATTCACGAAATGCCT
TGGTTTCGGTCATACGAGAACAGTATGTCAAGAGGAGCAAGAAAGGTCGAAGCGATAGAT
TTTATTCAGGATCACGACTGGCTGGTCAAAATCGAAATTCACCAGGCCTACTTTCACCTG
CTGGTCGCGGAGACACACAGGCGATTTCTTCGAGTGGTTTACAAGGAGGAGATCTTTCAA
TTAACAGCACTGCTGTTGGGCGTTTCCTCAGTGCCTCGGACTTTTGGAACAGTCACAAAC
TGGGTGGCCGAAATCCTCAGAAATCAGGGCATATGTCTAGTAGTGTACCTAGACGACTTC
CTTTTAGCCAATCAGAACAGAAACAAGCTTATAGCACAGGTTGCGGAAACTCTGGCTATC
TTAAAATCTCTGGGACGGTACTTAAATGTAAAAAAATCAATGACCGAACTAACTCACAAA
CTGGAATACCTAGGTCTGGTTTGGGACATTCAGAGTCAAATAATAGCACTGCCGACCCGA
AAAGTTCTAAGCATAAAGAATTCCTTCAGTGGCTTGTTAACCCGAGAAAAAAAGTTCATT
AAGGGAGCTTCAGAGTCAACTAGGCAAATTAAACTTTACCAACCATGCCATCGAGGTCGG
CTTCACTGA
Protein sequence:
MPPNTESITDIPQKHTGGWQNLHRATKNTYELPSPIHEMPWFRSYENSMSRGARKVEAID
FIQDHDWLVKIEIHQAYFHLLVAETHRRFLRVVYKEEIFQLTALLLGVSSVPRTFGTVTN
WVAEILRNQGICLVVYLDDFLLANQNRNKLIAQVAETLAILKSLGRYLNVKKSMTELTHK
LEYLGLVWDIQSQIIALPTRKVLSIKNSFSGLLTREKKFIKGASESTRQIKLYQPCHRGR
LH