New model in OGS2.0 | DPOGS201145  |
---|---|
Genomic Position | scaffold1000:- 45649-66599 |
See gene structure | |
CDS Length | 1905 |
Paired RNAseq reads   | 2583 |
Single RNAseq reads   | 6885 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003950 (6e-75) |
Best Drosophila hit   | CG6293 (0.0) |
Best Human hit | solute carrier family 23 member 2 (5e-122) |
Best NR hit (blastp)   | PREDICTED: similar to ascorbate transporter [Nasonia vitripennis] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG6293-PA [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0008520 L-ascorbate:sodium symporter activity GO:0016020 membrane GO:0055085 transmembrane transport |
InterPro families   | IPR006043 Xanthine/uracil/vitamin C permease |
Orthology group | MCL12458 |
Nucleotide sequence:
ATGGTGCATCAGAACATCCAAATCGGTCTGGAAAATGTCTTACGGGATTTGTTCAAGGAA
CTCTTCATAAGTACACCTGTACTGGACGTTTCACTGGCATGTTCGGTAGAACGTGTGGCA
ATAGTCGAGTACTCTTATAGGTCCCACCTAATGATTTTAACGTGGGATATCTTTAACATT
CCCATGGAAGTGCTAACAGCCGACTGCTGGGACTCGAATCCTGAGAATGCGCAGAGCCTG
CCAAAGGAGGAGAGAAAAGGGAACGTGACATACGGCATTGACGATGCACCGCCCTGGTAT
TTATGTATATTCATGGCTCTTCAGCACTACCTGACAATGATCGGTGCCATAGTCGCCATC
CCTTTCATCCTGTGTCCGGCGCTGTGCATGCAGGAGACAGACCCTGACAGATCCAACATC
ATCTCAACGATGATATTCGTCACTGGATTAGTGACCTGGTTCCAAGCGACGTTCGGTTGT
CGTCTGCCCATCGTGCAGGGTGGTACTATATCGTTCCTGGTGCCAACCTTGGCCATCCTC
GGTCTGCCGACCTGGAAGTGTCCAGACTCCGGAACTCTCTCAGCGATGACGGATGATGAG
AGACGCCTCGTGTGGACCACCAGAATGTGCGAATTGTCAGGCGCTATCGCTGTCTCGGCC
TTATTCCAAGTCTTTGGAGGCTACTTCGGCATCATCGGCTCCTTACTGCGGTTTGTGACT
CCGCTCACTATAGCGCCCACGGTGGCCCTGGTGGGACTTACCTTATTCGACCACGCGGCC
GGCGCAGCTTCCCAGCAGTGGGGTATCGCCGCTGGAACTTTCACGTTGCTGACTATATTC
TCACAATGCATGAGCGAAGTCCGGATACCGACGCTGACGTGGAAGCGAGCGAGCGGCTTC
ACTATCATATGGTTTCCACTGTTCAAGCTGTTTCCCGTGTTATTAACTATAGCTATAATG
TGGGTGGTGTGCGGCGTGTTGACTGCTACAAACGTCTTCCCAGCGGGTCATCCGGCGAGG
ACTGACCTCAAGCTTAACATCATAGAGGACGCTCCGTGGTTCAGAGTTCCATATCCCGGT
CAATGGGGTGTACCGACCGTGAGTGTTGCGGGTGTGTTGGGTATGCTGGCCGGAGTACTC
GCCTGTACCGTGGAGTCCATCAGTTACTATCCCACCACAGCCAGGATGTGTGCGGCGCCC
CCTCCCCCCCTGCATGCTATCAACCGCGGTCTTGGTACGGAAGGCCTGGGAACAATGCTG
GCTGGTCTGTGGGGCTCCGGGAACGGAACTAACACCTTCGGCGAGAACGTTGGAGCTATT
GGCGTTACCAAGGTAGGTTCCCGGCGCGTGGTACAGTGGGCGGCTGGCTTGATGGTGGTG
CAGGGTGTCGTGGGTAAGCTCGGAGCCGTCTTCATCATCATACCGCAGCCAATCGTCGGC
GGACTCTTCTGTGTCATGTTTGGGATGATCTCCGCCTTCGGTCTATCGGCTCTTCAGTAC
GTGAACCTGAACAGTTCGCGGAACCTGTACATCATCGGCTTCAGTCTGTTCTTTCCGCTG
GTTCTGACTCGCTGGATGTCGGAACACAGCGGCGTCATACAAACTGGTGTGGAGGCTCTT
GATGCGGTGCTTCAAGTGCTGCTGTCTACCAGCATACTGGTGGGAGGAGTCGTCGGTTGT
TTGTTGGACAACCTGATACCAGGGACGGATGAAGAGAGAGGTCTGGCGGCGTGGGCGAAG
GAGATGAGTTTAGAAACCAGCGGGGACTCTTACGGCAACACTTACGACTTTCCCATAGGA
ATGAGCCTCGTTACACGATTCACATGGACTCAGTACCTGCCGTTCATGCCGACCTACGAA
GCCGGCAAGTTTACAGCTCTCTTCAAGAGGAAAAAGGAATCTTAA
Protein sequence:
MVHQNIQIGLENVLRDLFKELFISTPVLDVSLACSVERVAIVEYSYRSHLMILTWDIFNI
PMEVLTADCWDSNPENAQSLPKEERKGNVTYGIDDAPPWYLCIFMALQHYLTMIGAIVAI
PFILCPALCMQETDPDRSNIISTMIFVTGLVTWFQATFGCRLPIVQGGTISFLVPTLAIL
GLPTWKCPDSGTLSAMTDDERRLVWTTRMCELSGAIAVSALFQVFGGYFGIIGSLLRFVT
PLTIAPTVALVGLTLFDHAAGAASQQWGIAAGTFTLLTIFSQCMSEVRIPTLTWKRASGF
TIIWFPLFKLFPVLLTIAIMWVVCGVLTATNVFPAGHPARTDLKLNIIEDAPWFRVPYPG
QWGVPTVSVAGVLGMLAGVLACTVESISYYPTTARMCAAPPPPLHAINRGLGTEGLGTML
AGLWGSGNGTNTFGENVGAIGVTKVGSRRVVQWAAGLMVVQGVVGKLGAVFIIIPQPIVG
GLFCVMFGMISAFGLSALQYVNLNSSRNLYIIGFSLFFPLVLTRWMSEHSGVIQTGVEAL
DAVLQVLLSTSILVGGVVGCLLDNLIPGTDEERGLAAWAKEMSLETSGDSYGNTYDFPIG
MSLVTRFTWTQYLPFMPTYEAGKFTALFKRKKES