| New model in OGS2.0 | DPOGS201156 |
|---|---|
| Genomic Position | scaffold1000:+ 79853-80665 |
| See gene structure | |
| CDS Length | 369 |
| Paired RNAseq reads | 58 |
| Single RNAseq reads | 396 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003954 (4e-49) |
| Best Drosophila hit | Autophagy-specific gene 12 (3e-32) |
| Best Human hit | ubiquitin-like protein ATG12 (4e-32) |
| Best NR hit (blastp) | autophagy related protein Atg12-like protein [Bombyx mori] (5e-49) |
| Best NR hit (blastx) | autophagy related protein Atg12-like protein [Bombyx mori] (6e-50) |
| GeneOntology terms | GO:0000045 autophagic vacuole assembly GO:0005515 protein binding GO:0005624 membrane fraction GO:0034045 pre-autophagosomal structure membrane GO:0005737 cytoplasm GO:0006914 autophagy GO:0005625 soluble fraction |
| InterPro families | IPR007242 Autophagy-related protein 12 |
| Orthology group | MCL13212 |
Nucleotide sequence:
ATGAGTGATGAAAAACAATCAGATGATACATCCCAAGCAGAAATCGTAAACAGTGAAAAA
GATGAACAGAAAGATAACAGTGACAGAGGAAAAACAGACAAAGTTAAAATTGATATTTTG
CTAAAGGCGACAGGTGACGCTCCTATAATGAAAAAAAAGAAATGGGCTGTGGATGCTGAG
AAACCTATCGGATGGATCATGGAATTTGTTAAAAAGTACCTAAAACTAGAACCTGAAGAA
AGATTGTTTCTATATGTCAATCAAACATTTGCACCGTCCCCCGACCAGCTGATCAAGAAT
TTGTATGAATGTTTTGGGACGGACGGTAAACTGGTGCTGCATTATTGTAAGAGTCAAGCT
TGGGGATGA
Protein sequence:
MSDEKQSDDTSQAEIVNSEKDEQKDNSDRGKTDKVKIDILLKATGDAPIMKKKKWAVDAE
KPIGWIMEFVKKYLKLEPEERLFLYVNQTFAPSPDQLIKNLYECFGTDGKLVLHYCKSQA
WG