| New model in OGS2.0 | DPOGS210057 |
|---|---|
| Genomic Position | scaffold162:- 110395-119626 |
| See gene structure | |
| CDS Length | 1482 |
| Paired RNAseq reads | 116 |
| Single RNAseq reads | 360 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012697 (2e-34) |
| Best Drosophila hit | spatzle 5 (9e-32) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to GA22158-PA [Tribolium castaneum] (7e-38) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013304 [Tribolium castaneum] (2e-37) |
| GeneOntology terms | GO:0007399 nervous system development GO:0031637 regulation of neuronal synaptic plasticity in response to neurotrophin GO:0008045 motor axon guidance GO:0010941 regulation of cell death GO:0021556 central nervous system formation GO:0008083 growth factor activity GO:0007411 axon guidance |
| InterPro families | ND |
| Orthology group | MCL16535 |
Nucleotide sequence:
ATGCCTAGATTTCTGACTATTCCAGCAGCTATTAGTAGAGAAGCTGCTCGTCTGAGCCAA
TGGCGGACAGCGAAAGGATCATCAGGGATACTGTGGGCTGCCACGAAAGGCGCGGGTTAC
AGTTGTCCCTACGGCCAGAACTGTTTGTATGAGCCGGCGCCCCCTGGACGCGCACCCGCC
TGCGCTCAACCCGGCCTCACCTACTGCCTGCATCCGGATCCATATCCAGAGAAAGTGATC
AGGAAACTGGTCGAAGCCGGTCAGTACGACATCCGGACGTTGCTATCCGACGAGAGTCGC
GATAACTTCCAAGACAATAAGAAGACCACTTACCCGTACGGATACGGCCCCAACTCCTTA
CCACACGTCGACCAAATATCACTCGTCGACGATGGACACAAAGATTATAACACTAAGTAC
CACAAGTACAACCAAGGTGAGAAAGTGATCCGGAAACTGGTCGAAGCCGGTCAGTACGAC
ATCCGGACGTTGCTATCCGACGAGAGTCGCGATAACTTCCAAGACAATAAGAAGACTACT
TACCCGTACGGATACGGCCCCAACTCCTTACCACACGTCGACCAAATATCACTCGTCGAC
GATGGACACAAAGATTATAACACTAAGTACCACAAGTACAACCAAGATATATTTTCTGAG
AAGGCTCCTCTCCAGCCTCCCTCGGCCGCAGATCCAACGCCGTATGATATCAAGGCCTAT
CAGGCCGCCAATTATTCCAAGTTCGGCTTCCAAGGATACACATCACCAACTTTTTGGGAT
CCCTCCATTAACCAGTTCCAATATGAAAACAGACGACTGAGAGAGAACGAAAATGTGAAC
CTTTACAATCCGAATTATTTCAATGGCCCGCTCTATCAAAACTATGAGTCGAATTGGTTG
AGAGCGTCTAGCGGGGTCACGCAGTACAACCCGAGCGAATGGTGGAAATATATATCACCG
TCTCGGTCAAACGCCGAGGTGTCCATCCAGCGCTCGATCACCTTCCCGACACGAACCACC
ACGAGCAGACACGCGACACACGCGCGCCGGAAACGGAACACGGAACTTGTGGAGGCTGCG
GCGAGACGCACGTTAACAGGGGCTGAGGCGCTCAGGATCGCGCTGGGATTGGCTAACGAG
GACTCGTCAGCGGAGCGTCCTCGCCGCCAGGCGTCCACGGGTGAGGAGTTATGCCGAGTC
CGCACTCAGTTTATAAATCCTCGAGCCGCTCTCAATAACAAAGGCAGCTGGCGCTACGTC
GTCAACATGCCGGATAACATGACACAACTAGTGCGAGCTGAGATATGCGCGTCAACAGAA
TGCAGTGGGTTATGCACCATACCTCTTGGCTACACTTCTAGATGCGAGCAAAAGTATATA
CAAAAACGTTTGGTAGCGTTGGAGTCCAGTGGACAGAACTTGTACACCGACGTGTTCTGG
ATCCCGAGCTGCTGCCAATGTACTATCATGAACAATAACTAA
Protein sequence:
MPRFLTIPAAISREAARLSQWRTAKGSSGILWAATKGAGYSCPYGQNCLYEPAPPGRAPA
CAQPGLTYCLHPDPYPEKVIRKLVEAGQYDIRTLLSDESRDNFQDNKKTTYPYGYGPNSL
PHVDQISLVDDGHKDYNTKYHKYNQGEKVIRKLVEAGQYDIRTLLSDESRDNFQDNKKTT
YPYGYGPNSLPHVDQISLVDDGHKDYNTKYHKYNQDIFSEKAPLQPPSAADPTPYDIKAY
QAANYSKFGFQGYTSPTFWDPSINQFQYENRRLRENENVNLYNPNYFNGPLYQNYESNWL
RASSGVTQYNPSEWWKYISPSRSNAEVSIQRSITFPTRTTTSRHATHARRKRNTELVEAA
ARRTLTGAEALRIALGLANEDSSAERPRRQASTGEELCRVRTQFINPRAALNNKGSWRYV
VNMPDNMTQLVRAEICASTECSGLCTIPLGYTSRCEQKYIQKRLVALESSGQNLYTDVFW
IPSCCQCTIMNNN