| New model in OGS2.0 | DPOGS210060 |
|---|---|
| Genomic Position | scaffold162:- 1181-33738 |
| See gene structure | |
| CDS Length | 6135 |
| Paired RNAseq reads | 15350 |
| Single RNAseq reads | 35961 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012701 (0.0) |
| Best Drosophila hit | CG9674, isoform A (0.0) |
| Best Human hit | dihydropyrimidine dehydrogenase [NADP+] isoform 1 (4e-18) |
| Best NR hit (blastp) | glutamate synthase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | glutamate synthase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004355 glutamate synthase (NADPH) activity GO:0005506 iron ion binding GO:0006537 glutamate biosynthetic process GO:0055114 oxidation reduction GO:0051536 iron-sulfur cluster binding GO:0050660 FAD binding GO:0010181 FMN binding |
| InterPro families | IPR012220 Glutamate synthase, eukaryotic IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 IPR017932 Glutamine amidotransferase, type II IPR002489 Glutamate synthase, alpha subunit, C-terminal IPR009051 Alpha-helical ferredoxin IPR013785 Aldolase-type TIM barrel IPR012285 Fumarate reductase, C-terminal IPR002932 Glutamate synthase, central-C IPR000583 Glutamine amidotransferase, class-II IPR006982 Glutamate synthase, central-N IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase IPR001327 Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region |
| Orthology group | MCL16207 |
Nucleotide sequence:
ATGGTACACAGCAGAAGGTACTCGCGTCTCGAGAAGCCTATTGGTCAGTTCCTTTTCTGT
GACGTTTCTGACAAATATGAAATAAACGTCATCCGTGACAGGTTTAGTATGGAGTGGGAA
GCACCACCCAAGCAAGGCTTGTACGACCCCCAAAACGAGCACGAGGCTTGCGGTGTTGGA
TTTGTTGTTGCTATCGACGGAAAACGTTCTCATAAGATCGTTCGCGATGCCGAAGTCCTC
GCAAAGCGCATGGAACACCGTGGAGCGTGCGCCTGTGACAATGACACCGGCGATGGCGCT
GGTGTGTTGACCGCCATCCCTCACCAGTTCTACTGCGCTCAGCTAAGAGACAGCCACCAA
ATCGATTTACCCCCGTTCGGGAAGTACGCCACCGGCATCTTCTTCCTGGACAAGCTTCAC
CATCAGGACATCGAGAAGAAGTTCCAGGAGTTAGCTGAGAGCCTCCACCTCCGCGTGATC
TGCTGGAGGACTGTACCAACCAATAACGCCACTATCGGTCAAGTGGCTCGTAACTCGGAG
CCGTATATGCGCCAAGTGTTTGTTACCGGAGATATCGGGGATGAACCTCAGCTAGCTCGT
CAGATCTTCGTGTTACGCAAGCGCGCCTCCCACGAGCTGGTGGTGCCGGGAGCCCGCTTC
TATATTTGCAGCTTATCTCTGAGGACCGTCGTTTACAAGGGACTCCTCACATCCAATCAG
CTATGGGAATACTTCAAGGATCTGAGCAACCCGGCGTTCACTACATACCTGGCGCTGGTC
CACACTCGCTTCTCAACCAACACCTTCCCCAGCTGGGAGAGAGCCCATCCTTTGAGAGTG
CTTGCCCACAATGGAGAAATAAATACATTACGAGGTAACGTCAACCTGATGAAGGCCCGG
GAAGGTGTCATGAAGAGTGATATATTTGGAGATGAACTAAAGAAGCTGTACCCGGTGGTG
GAACCCAACTTATCTGACTCCGGCTCAGCCGATTGTGTGCTGGAGTTCCTCCTGCACTGC
GGTCATAGATCTTTGCCGGAAGCTGTCATGACTATGGTACCGGAAGCATGGCATAATGAC
GTCACCATGCCCGCAGAAAAGAGGGATTACTACCAATGGGCAGCTTGTGCCATGGAGCCA
TGGGATGGGCCAGCTCTAGTGTCCTTTACTGATGGAAGATATATTGGCGCCATTCTGGAC
AGAAATGGTCTGAGACCATCCAGGTTCTATGTCACGAGTGAGAACATTCTCGTGATGGCC
TCGGAGGTGGGAGTCTATGATGTGGATCCGGAGAAGGTTATCCTCAAGAGTCGTCTGAAG
CCAGGCCGCATGTTGTTAGTGGACACCGAGGAGAAGAGAATCATACAAGACGTGGAGCTG
AAGATGGACATCGCCAGGAGCAGACCGCACTCACAGTGGCTCAAGGAGCAGATAACAATG
GAGGATATTTACAAATCGGTGTCCCAGAGCGATTTGTCCAGTAATGGGTGTGTGAATGGA
GCTATATCTGGTCTGGGGGACAAGAGGCTCGGTCTGTTTGGATACACCATAGAGTCCATC
AACATGCTGCTACTGCCCATGATACAGAACAAGAAAGAGGCTCTCGGCAGCATGGGGAAC
GACGCGCCCCTGGCTTGTCTGTCTCGTTTCGAACCCCTGCCCTACGACTACTTCAAGCAG
CTGTTCGCACAGGTCACCAACCCACCCATCGACCCCTTCCGTGAGAAGATCGTGATGTCC
CTGATGTGTCCGATCGGCCCGGTGGCCAACATCCTGCGGCCCGGCGCGGAGTTCGTGCAC
CGCCTGTTCCTGCCGCAGCCCGTGCTGTCCATCCCGGACCTCAAGGCGCTGATCGCCACC
ACACATCGCGGCTGGAGGACGAAGGTTATCGATTGTACGTTCGATATATCCGACGGTCCC
ATGGGCCTGGAGCCGGCCCTGACTCGCCTGGCGGGGGAGGCGCATGACGCTGCTGAGGAC
GGCTACCAGCTGCTGGTGCTCTCCGACCGCCAGGCCGGGCCAACTAGGGTCCCGATCAGC
TCGTTACTCGCCCTGGGTGCGGTCCATCACCACCTTATCGAGACCCGTCAGCGCATGAAG
GTCGGGGTCCTCGTGGAGACGGCCGAGGCCAGGGAAGTCCATCACATGTGTGTCTTACTC
GGTTATGGAGCCGACGCTATATGTCCCTACCTGGCCTTCGAACTAGCGTTCTCTCTTCGA
AACGACAACCTCATAGATCCAAACTTAACGGACAGCGACATATACCTGGCGTACCAGAAG
GCCATAGAGACGGGTCTGGCTAAAGTCATGGCCAAAATGGGCATCAGCATGCTGCAGTCG
TACAAAAGCGCCCAGATATTCGAGGCGGTCGGCCTCAGCGAGGAAGTTATCGACAAATGC
TTCAGAGGCACTCAGTCTAGAATCGGTGGGATTACCTTTGAGATTCTCTCTCAGGAGACT
TTCGACCGACACGCCCTCACGTACGGCAACTGTAACGACATGCTGGTGCTACGTAACCCC
GGCAACTACCACTGGAGGGCTGGCGGGGAGAAGCATATCAACGACCCGCTGTCCATCGCC
AACCTTCAGGAGGCCGCCGTCAACAACACGGCTTCCGCCTACGACAGATTCAGAGAGAGC
GCTCTGGAATCTATCCGCGCCTGTACACTCCGAGGTCAACTCGAGCTGGTCACCCTGGAC
GAACCCCTGCCGCTATCAGAGATAGAACCGGCTTCGGAGATAGTCAAGAGATTCGCTACT
GGCGCGATGTCCTTCGGTTCAATATCTATGGAGGCTCACTCCACACTGGCCATCGCCATG
AACAAGATCGGAGGAAAGTCCAACACCGGGGAGGGGGGAGAAACCGCTGAGAGATATCTC
AACCAGGATCCAGACCACAACATGCGCTCGGCGATCAAGCAGGTGGCGTCCGGGAGGTTC
GGAGTGACGGCGTCATACCTCGCACATGCTGACGACCTGCAGATTAAGATGGCGCAGGGA
GCCAAGCCGGGGGAGGGCGGGGAACTACCCGGGTACAAAGTAACAGAGGAGATAGCTCGT
ACCCGTTGTTCAGTTCCGGGGGTAGGGCTGATCTCCCCGCCTCCTCACCATGATATATAC
TCCATCGAGGACCTCGCCGAGCTGATCTACGATCTCAAATGTGCCAACCCTAAAGCACGC
ATCAGTGTGAAACTGGTCTCGGAGGTTGGAGTGGGAGTAGTGGCTTCCGGTGTCGCTAAG
GGTAAAGCGGAACACATCGTCATATCCGGCCACGACGGAGGCACTGGGGCCAGTTCCTGG
ACGGGCATCAAGAGCGCGGGGCTGCCCTGGGAGTTGGGCGTGGCGGAAACACACCAGGTG
CTCGTATTGAACGACCTGAGGTCGCGTGTGGTGGTCCAAGCTGACGGTCAGATCCGCACC
GGCTTCGACGTGATAGTGGCGGCGCTGCTGGGAGCTGACGAGGTCGGCTTCAGCACCGCG
CCATTGATAGCGTTAGGCTGCACTATGATGAGGAAGTGTCACCTGAACACCTGTCCGGTT
GGCATCGCGACTCAGGACCCCGTGTTGAGGAAGAAGTTCGCGGGGAAGCCGGAACACGTC
ATTAACTACCTGTTCATGTTGGCTGAGGAGGTCCGTACGCACATGTCACGCGTGGGTGTC
CGGAGCTTCCAAGAGCTGGTCGGTCGGACAGACCTCCTGAAGGTGAGGGAGAAGAACGAC
AACTACAAAGCGCGGCTCCTCAACCTCGCTCCCATACTGAAGAACGCGTTACACATGAGG
CCGGGCGTCGACATACGAGGCGGCTCTAAACCACAGGACTTCCAGCTGGAGAAACGCCTG
GACAACCAGCTGATCCAGCAGTGCTCTGGAATACTGGACGGAACCCAACAACACGTACAC
ATCGACATGAAGATCACTAACGAAGACCGAGCTTTCACTTCGACACTCTCCTATCATATT
GCCATGCAGTATGGAGATTCCGGTCTCCCTGATGGCACCACGGTGGACATCAGCCTCACC
GGCTCAGCCGGACAAAGCTTCTGTGCCTTCCTCAGCAAAGGAATCACCGTCACCTTGGAA
GGAGACGCCAATGATTACGTCGGCAAGGGCCTCTCCGGCGGCACGGTCATCATCTACCCT
CCAAAGAACTCTCCATTCCAATCTCACTTGAATGTGATCGTTGGGAACGTTTGTTTGTAT
GGAGCTACGAGTGGAAGGGCTTATTTCAGGGGTATAGCGTCTGAGCGTTTCTGTGTCCGT
AACTCTGGTTGTGTGGCGGTGTCGGAGGGCGCGGGCGACCACGGCTGCGAGTACATGACG
GCTGGCAGGGTGCTCATACTAGGACTGGTGGGGAGGAACTTCGCCGCGGGGATGAGCGGT
GGTATAGCGTACGTGTACGACATCGATGGGTCATTCAAGAGCAAATGTAATCCGGAGATG
GTGGAACTGCTGCCACTGGAAATACAAGAAGACTTGGACGAGGTGCAGAAACTTCTAGAA
GAATTCGTGGAGTATACCGGATCATTAATCGCTAAAGAACTCCTAGAGACCTGGCCGGAA
CCAGCTAAGAAGTTCACGAAGGTGTTCCCTTACGAATACCAGCGCGCCTTGAAACAGATC
GCTCTCAAGCAGACGGCGCCCAAGGTGGAAACTAACGGAAAGCTTGAAGAAAACGGAGTC
GTCGATATAGAAGAAGCTGTCAGAAACGTGGAACAGGACAAGAAGAACCTGGAGAAGGTT
CTAGATAAGACCAGAGGATTTATAAAGTATCCCCGCGAGACGTCAGTGTACCGGCCGGCT
GAGAAGCGTCTCCGTGACTGGGAGGAGATCTACGACCAGTCGTCCGTGAGGCGCGGCCTG
AGAGTGCAGGCTGCTCGCTGCATGGAGTGCGGGGTGCCGTTCTGTCAGAGCGGCCACGGC
TGCCCTCTAGGGAACATCATACCCAAGTGGAACGATCTCGTGTACAGGGCCGACTGGAAA
CAAGCTCTGGCACAACTCTTGCAGACTAATAATTTCCCAGAGTTCACGGGTCGCGTGTGT
CCCGCGCCGTGCGAGGGCGCCTGTGTGCTCGGCATCTCCGAACCTCCCGTCACCATCAAG
AACATCGAGTGCGCCATCATTGACCACGCCTTCAGCAGCGGATGGGTTCAACCGGAGATC
CCGGAGTATCGTAACGGTAAGACAGTCGCCATCGTGGGGTCGGGGCCGGCCGGCCTGGCC
TGCGCTCATCAGCTAAACAAGGCCGGTTACTCTGTGACGGTGTTCGAGCGCAACGACCGT
CCGGGCGGCCTGCTCCAGTACGGCATCCCCAGCATGAAGCTCAGCAAGCACGTGGTGCAG
CGGAGGATCAAGCTCATGATGGACGAGGGGGTCGTGTTCAAGTGCAACGTGGACGTCGGC
AAGGACATCTCCGCCGCGGACCTCGCCAACGAGTACGACGCGCTAGTCCTGTGTATGGGC
GCGACGTGGCCGCGGGATCTCCCTCTGAGCGGCCGGCAGCTGGGCGGCATACACTTCGCC
ATGGAGTTCCTCGAGGGCTGGCAGAAGAAACAGGCGGGCGGCGGCACCGGCAAACTACCC
GCGCTCAGCGCCAAGGACAAGAACGTACTCGTTATAGGGGGAGGGGACACCGGATGCGAC
TGTATAGCGACGTCTCTACGCCAGGGCGCCAAATCTATAACGACCTTCGAGATACTTCCC
GAGCCCAAACCCACGCGGACCAAGGAGAACCCGTGGCCGCAGTGGCCGAGGGTCTTCCGA
GTGGACTACGGCCATGAGGAGGTGAAAGTGAAATTCGGTCACGACCCTAGAAAATTCTCG
ACTCTCACCAAGGAGTTCCTCGACGATGGCGAGGGCAACGTGTCGGGGGTGAGTGCGGTG
GAAGTGGAGTGGACGCGCGGTCCGGGCGGGAGGTGGGAGATGGCCGAGAAGGACGGCTCC
AAGCGAGTCGTTCCGTGCGACCTGGTCCTCCTCGCCATGGGCTTCCTGGGACCTGAGAGA
TACGTCGCCTCGCAACTCGGTATGACGTGCAATATCAATATGGGTTCAATTAACTTATCT
CAACTAAAATTTGAATGGAACATAGGACACGTTCATAGACACGAACATGCTATTAATAAA
TTGTTTTTTTTTTAA
Protein sequence:
MVHSRRYSRLEKPIGQFLFCDVSDKYEINVIRDRFSMEWEAPPKQGLYDPQNEHEACGVG
FVVAIDGKRSHKIVRDAEVLAKRMEHRGACACDNDTGDGAGVLTAIPHQFYCAQLRDSHQ
IDLPPFGKYATGIFFLDKLHHQDIEKKFQELAESLHLRVICWRTVPTNNATIGQVARNSE
PYMRQVFVTGDIGDEPQLARQIFVLRKRASHELVVPGARFYICSLSLRTVVYKGLLTSNQ
LWEYFKDLSNPAFTTYLALVHTRFSTNTFPSWERAHPLRVLAHNGEINTLRGNVNLMKAR
EGVMKSDIFGDELKKLYPVVEPNLSDSGSADCVLEFLLHCGHRSLPEAVMTMVPEAWHND
VTMPAEKRDYYQWAACAMEPWDGPALVSFTDGRYIGAILDRNGLRPSRFYVTSENILVMA
SEVGVYDVDPEKVILKSRLKPGRMLLVDTEEKRIIQDVELKMDIARSRPHSQWLKEQITM
EDIYKSVSQSDLSSNGCVNGAISGLGDKRLGLFGYTIESINMLLLPMIQNKKEALGSMGN
DAPLACLSRFEPLPYDYFKQLFAQVTNPPIDPFREKIVMSLMCPIGPVANILRPGAEFVH
RLFLPQPVLSIPDLKALIATTHRGWRTKVIDCTFDISDGPMGLEPALTRLAGEAHDAAED
GYQLLVLSDRQAGPTRVPISSLLALGAVHHHLIETRQRMKVGVLVETAEAREVHHMCVLL
GYGADAICPYLAFELAFSLRNDNLIDPNLTDSDIYLAYQKAIETGLAKVMAKMGISMLQS
YKSAQIFEAVGLSEEVIDKCFRGTQSRIGGITFEILSQETFDRHALTYGNCNDMLVLRNP
GNYHWRAGGEKHINDPLSIANLQEAAVNNTASAYDRFRESALESIRACTLRGQLELVTLD
EPLPLSEIEPASEIVKRFATGAMSFGSISMEAHSTLAIAMNKIGGKSNTGEGGETAERYL
NQDPDHNMRSAIKQVASGRFGVTASYLAHADDLQIKMAQGAKPGEGGELPGYKVTEEIAR
TRCSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAK
GKAEHIVISGHDGGTGASSWTGIKSAGLPWELGVAETHQVLVLNDLRSRVVVQADGQIRT
GFDVIVAALLGADEVGFSTAPLIALGCTMMRKCHLNTCPVGIATQDPVLRKKFAGKPEHV
INYLFMLAEEVRTHMSRVGVRSFQELVGRTDLLKVREKNDNYKARLLNLAPILKNALHMR
PGVDIRGGSKPQDFQLEKRLDNQLIQQCSGILDGTQQHVHIDMKITNEDRAFTSTLSYHI
AMQYGDSGLPDGTTVDISLTGSAGQSFCAFLSKGITVTLEGDANDYVGKGLSGGTVIIYP
PKNSPFQSHLNVIVGNVCLYGATSGRAYFRGIASERFCVRNSGCVAVSEGAGDHGCEYMT
AGRVLILGLVGRNFAAGMSGGIAYVYDIDGSFKSKCNPEMVELLPLEIQEDLDEVQKLLE
EFVEYTGSLIAKELLETWPEPAKKFTKVFPYEYQRALKQIALKQTAPKVETNGKLEENGV
VDIEEAVRNVEQDKKNLEKVLDKTRGFIKYPRETSVYRPAEKRLRDWEEIYDQSSVRRGL
RVQAARCMECGVPFCQSGHGCPLGNIIPKWNDLVYRADWKQALAQLLQTNNFPEFTGRVC
PAPCEGACVLGISEPPVTIKNIECAIIDHAFSSGWVQPEIPEYRNGKTVAIVGSGPAGLA
CAHQLNKAGYSVTVFERNDRPGGLLQYGIPSMKLSKHVVQRRIKLMMDEGVVFKCNVDVG
KDISAADLANEYDALVLCMGATWPRDLPLSGRQLGGIHFAMEFLEGWQKKQAGGGTGKLP
ALSAKDKNVLVIGGGDTGCDCIATSLRQGAKSITTFEILPEPKPTRTKENPWPQWPRVFR
VDYGHEEVKVKFGHDPRKFSTLTKEFLDDGEGNVSGVSAVEVEWTRGPGGRWEMAEKDGS
KRVVPCDLVLLAMGFLGPERYVASQLGMTCNINMGSINLSQLKFEWNIGHVHRHEHAINK
LFFF