New model in OGS2.0 | DPOGS207227  |
---|---|
Genomic Position | scaffold2098:- 12932-16466 |
See gene structure | |
CDS Length | 1617 |
Paired RNAseq reads   | 63 |
Single RNAseq reads   | 188 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008557 (1e-144) |
Best Drosophila hit   | CG9009 (1e-97) |
Best Human hit | acyl-CoA synthetase family member 3, mitochondrial precursor (5e-33) |
Best NR hit (blastp)   | PREDICTED: similar to AMP dependent coa ligase [Acyrthosiphon pisum] (8e-130) |
Best NR hit (blastx)   | PREDICTED: similar to AMP dependent coa ligase [Acyrthosiphon pisum] (1e-120) |
GeneOntology terms    | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process |
InterPro families    | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
Orthology group | MCL10591 |
Nucleotide sequence:
ATGAAGCATGTCTGGTCGGCGAATAATATAGTATCATCACCCTTCGAAGATGTCATAATT
CCCGATCTAACTATCCCTGAACATGTCTGGAGTAATATGCATAGATGGTCGGATAAGATA
GCTATCGTTTGTGGAGTAACCGAGAGAAAATATACATATTTGCAATTATATCGTAAATCT
CAAACATTAGGGGCGAATTTAAGGAGAAACTTTGGCATTAAAAATGGTGATCTCATAGCT
GTTATGTTGTCAAATATACCTGAATATCCTATTATAACTTTGGGAGTATTAAGCGCAGGA
GGAATTGTAACTACTCTGAATCCAATTTATACTTCATATGAAGTACAAAGGCAATTGATG
AGTGCGCATGTTAAGATAATAATAACTTCACCAGAGAATGTATCCACTATAAAACAAGCA
TTGGATTTAAACAAAATGAGTACACCCATAATTGTAGTCGATTTCAATAGCCCACGTCCC
GATGGAACTATATCGTTTAATGAAATTATAAACGATACTATTGACACAAGTATTTTAAAA
GAAGTCAAAACTAAATCTAGTGATGTGTCATTACTACTGTATTCAAGTGGAACGACAGGA
CTACCGAAAGGTGTAGAATTAACGCATAGAAATATAGTTGCTAATTCTGTACAACAGGAT
CCAGCGGAACTCAGACATTACGATCTGACAACAGAATCAAATCAAGATACAATTTTGGCA
TATCTTCCCATGTATCACAGCTATGGGATGTCTGTAATGATGTTACACAAACTAGCAAAT
GGCTTAAAGCTAGTAACTATACCTAAATTTCAACCTGAAACATTTATTAGGATTTTGGAA
AATTATAAGATAAATTTAATATATCTTGTTCCGCCTACTGTTTTATTTTTGGGGTCAAAC
CAGGAGGTGAAATCGAAACATTTTGAATATTTAAAATACGTAGGCTCTGGTGCAGCGCCA
TCGCCAAAAGCAGATATCGAGAGGTTGTTAGCGAAATTCGGTCATGGAGTACGTTTCAGT
CAACTATATGGCTTAACGGAAGTCTCCCCATTGGCTACAATATCCCCTGTTAACTGCAAC
AAATTTTTGACTGTGGGTTTTCCTTTGCCTAACATCCAATTCAGGATTGTTGACGACAAT
GACAACAATTTAGGGCCAGGACAGTTAGGAGAGTTGCTTATCAAAGGACCAAACGTAATG
AAAGGTTATAGGAATAATCCAGAAGCTAACAAACTTGTTCTCACAAATGGCTGGTTTCGA
ACTGGAGACCGAGCGCAGTTCGAAGAAGATGGATCTCTTGTTATTGCGGATAGATATAAA
GAACTAATAAAGGTAAATGCCTATCAAGTAGCACCAGCAGAGTTAGAAAGCGTAATAAAA
GATCATCCTGGTGTGTTTGATGTGGCTGTAGTCGGTATACCTGATAGTAAAACGGGACAG
AAGCCCAAAGCTTTTGTTGTTCCTAACAAAAATAGTCCAGCAAATGAAGCAGATATTATA
GAGTTTGTTAATAAGAAGGTCGCACCGTATAAACATATTAAGGAGGTCCAATTCATTGAG
AGCATACCAAAAAATCCTTCTGGTAAAATGTTAAGAAGGTTACTGCTTGAAAAATAA
Protein sequence:
MKHVWSANNIVSSPFEDVIIPDLTIPEHVWSNMHRWSDKIAIVCGVTERKYTYLQLYRKS
QTLGANLRRNFGIKNGDLIAVMLSNIPEYPIITLGVLSAGGIVTTLNPIYTSYEVQRQLM
SAHVKIIITSPENVSTIKQALDLNKMSTPIIVVDFNSPRPDGTISFNEIINDTIDTSILK
EVKTKSSDVSLLLYSSGTTGLPKGVELTHRNIVANSVQQDPAELRHYDLTTESNQDTILA
YLPMYHSYGMSVMMLHKLANGLKLVTIPKFQPETFIRILENYKINLIYLVPPTVLFLGSN
QEVKSKHFEYLKYVGSGAAPSPKADIERLLAKFGHGVRFSQLYGLTEVSPLATISPVNCN
KFLTVGFPLPNIQFRIVDDNDNNLGPGQLGELLIKGPNVMKGYRNNPEANKLVLTNGWFR
TGDRAQFEEDGSLVIADRYKELIKVNAYQVAPAELESVIKDHPGVFDVAVVGIPDSKTGQ
KPKAFVVPNKNSPANEADIIEFVNKKVAPYKHIKEVQFIESIPKNPSGKMLRRLLLEK