| New model in OGS2.0 | DPOGS213917 |
|---|---|
| Genomic Position | scaffold3099:- 5878-13596 |
| See gene structure | |
| CDS Length | 1398 |
| Paired RNAseq reads | 1262 |
| Single RNAseq reads | 3113 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004625 (1e-97) |
| Best Drosophila hit | CG31116, isoform C (1e-83) |
| Best Human hit | chloride channel protein 2 isoform 3 (5e-34) |
| Best NR hit (blastp) | chloride channel protein 2 [Culex quinquefasciatus] (1e-129) |
| Best NR hit (blastx) | chloride channel protein 2 [Culex quinquefasciatus] (1e-95) |
| GeneOntology terms | GO:0006821 chloride transport GO:0005254 chloride channel activity GO:0005247 voltage-gated chloride channel activity GO:0016020 membrane GO:0055085 transmembrane transport GO:0005626 insoluble fraction GO:0005902 microvillus GO:0005515 protein binding GO:0015629 actin cytoskeleton |
| InterPro families | IPR001807 Chloride channel, voltage gated IPR000644 Cystathionine beta-synthase, core IPR014743 Chloride channel, core |
| Orthology group | MCL10702 |
Nucleotide sequence:
ATGGGCGCCGCCCTAGGCCGGTTCACTGGAGAAGTGATGCACTACTTCTGCCCCCTTGGC
GTCGCTTACGGTGGACACATACAGAAGATATTGCCTGGTGGTTACGCGACAGTAGGTGCC
GCTGCGTTCACCGGGGCCGTAACTCACACCGTTTCTACGATCGTTATATGTATTGAGATG
ACAGGACAGGTGACTCACCTGCTGCCTATCATGGCGGCGGTGCTGTCCGCTAACGCGACA
GCGGCTCTGCTGCAGCCCTCGTGCTTCGACAGCATCATCCTCATCAAGAAGCTGCCTTAC
CTGCCCGATCTGCTCTCGTCAGCGAGTCGTATGTACGATATATGCGTGGAAGACTTCATG
GTGAGAGACGTCAAGTACATCTGGAACAGGATGACCTTCCAGCAGTTGAAGGATTTGCTT
AAAGAAAATAAGTCTATCAAGAGTTTCCCACTGGTATCCTCCCCATCCTCTCCCGTGCTC
CTCGGGTCCATCCATCGCTGGGAGCTGGTGCGCCTGATCGAGCAGCGTGCTGGACGAGCC
AGACGGCTCCAGGTTGCAGCTTTATGGAGACGAGAGGCTGAAGCTAGAAGAAGGCCCTCC
CGCTTTGAAGTCACCGCAGCCTCGCTTACTGATACCAGCAAGGCAGGGCTCGTACCACCA
CCCGGCCAGCTGTTCCGCCCTAAGTCTATCTTGAAGAAGACCAATTCGTTCACTCTAACT
CGTGGTCTAAGTTCACCTTCGACCCCCTCGACCCCGCAGCCTAATGTGTACACCACTGTA
ACCGGCGCGGAGACCAGGATCCGCGCGGCGTTCGAGGCTATTTTCAAGCGGTCAACTTTG
CTGCCGGACGTGGAGGGTGGACTCGGAGACCACGGCCTGCCCAGAAGTCCGTCCATCAAC
AAGAAAGTACAATTGCCCCGCGAGCGTGTATGTGACATGTCCCCCGAGGATCAACGAGCC
TGGGAGATGATGGAGATGTCCCGGGAGATAGACTTCGATAGAATGCTGACCATCGTCCGG
CATAGAGATATGACGGCGGAGGAGTCCGATCATGACGATGAAGACGACTCGCTGTACGTG
TGTCACATCGACCCAGCGCCCTTCCAACTGGTTGAGAGGACCTCGCTTCTTAAGGTCCAC
TCTCTCTTCTCTACTCTCGGCGTGAGTCGCGCATACGTCACCGCTATAGGAAGACTCATC
GGTGTTGTAGCGCTTAAAGAGCTTCGGAAGGCCATAGAGGATGTGAATTCCGGTACATTG
ACCCCCACCAGCCACACCGCTGCGGCGACGTCGCTTCCGGTCCCTCGACCTCCGACTGTC
CTGGTCCAACCGCCCCGGGAGCCCGCTCCTCCCTCCGACAAAGACACCGACAAACTGACA
GTTGCGAGCGATAAATGA
Protein sequence:
MGAALGRFTGEVMHYFCPLGVAYGGHIQKILPGGYATVGAAAFTGAVTHTVSTIVICIEM
TGQVTHLLPIMAAVLSANATAALLQPSCFDSIILIKKLPYLPDLLSSASRMYDICVEDFM
VRDVKYIWNRMTFQQLKDLLKENKSIKSFPLVSSPSSPVLLGSIHRWELVRLIEQRAGRA
RRLQVAALWRREAEARRRPSRFEVTAASLTDTSKAGLVPPPGQLFRPKSILKKTNSFTLT
RGLSSPSTPSTPQPNVYTTVTGAETRIRAAFEAIFKRSTLLPDVEGGLGDHGLPRSPSIN
KKVQLPRERVCDMSPEDQRAWEMMEMSREIDFDRMLTIVRHRDMTAEESDHDDEDDSLYV
CHIDPAPFQLVERTSLLKVHSLFSTLGVSRAYVTAIGRLIGVVALKELRKAIEDVNSGTL
TPTSHTAAATSLPVPRPPTVLVQPPREPAPPSDKDTDKLTVASDK