| New model in OGS2.0 | DPOGS203850 |
|---|---|
| Genomic Position | scaffold276:- 63029-66749 |
| See gene structure | |
| CDS Length | 1152 |
| Paired RNAseq reads | 332 |
| Single RNAseq reads | 825 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG42303 (1e-37) |
| Best Human hit | snurportin-1 (6e-43) |
| Best NR hit (blastp) | Snurportin-1, putative [Ixodes scapularis] (9e-47) |
| Best NR hit (blastx) | PREDICTED: similar to RNA, U transporter 1 [Monodelphis domestica] (3e-46) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006810 transport GO:0000387 spliceosomal snRNP assembly GO:0005829 cytosol GO:0005634 nucleus GO:0000339 RNA cap binding GO:0008565 protein transporter activity GO:0006886 intracellular protein transport GO:0006606 protein import into nucleus GO:0005643 nuclear pore |
| InterPro families | ND |
| Orthology group | MCL14446 |
Nucleotide sequence:
ATGGAAGATTTGGATATTTTAGAAAAGGCTTTAAAAAACCTTGAAGCTACTGAGGCATCA
GAAGAAAAGGCCAGTAATTTTGAAAGTCTTTATAAAAATTGGGGAAAAAGTGGTAGCCAA
GAAGAAAGAAGGAAGCAGTTATTAGAGAATCAGAAAGGGCAAAGGAAGAACAAAATCGAT
AATTTTCGTGGAATCTTGGATCTTGTAAATGCTGTTGAGGAAAGCAAGCTCTTTAAACCA
TATAAAAAGGTGCCATACAGGCCAAATATATATGTGTCCGGTTTTCACAAGACTTGTTTG
ACATATAGCAATGTTTTGATGTTGTCCGAGTGGATGATTGAAAAGCCAAATGATTTCGCC
ACTAATTGGTATGTGCTGCCATGTCCCAAAGGCATAAGGTTACTTGTTGTAGCTAATCAT
GGTACAACAAAGTTCTACACAAAGCGTGGTCAATTTAAATTTGAGTGCAACACTGGTTTA
CCTGGAGGCAATCCCTACAACTGCTACCGCAGGAACTGCTGTGTGTTGGACTGTTTCTAT
AATGAAAAAAATAACACAGTGTATCTCATTGACATGCTGGCTTGGAATAATCAACCAATG
ACCGATGGGGAGACAGAATTTAGACAATATTGGATGAAAACTCAACTTGAAGATTTCCCA
GATACAAAAACAATCAATAAGAAAAACAAGGTTATTATAAAATTACTCCCAATGATGCCA
TGCACAAGCCAATTCCTTAGTTTCCTTTTAAGCACATATCCACAGTTTGAGGATAACAAT
CCTCCCTTAGACGGTCTCCTTTTCTATCACAAACGTGCTCACTATGTGGCCGGTGAAACA
CCTCTAGTTGGATGGCTCTACCCATATATGATACCTGAAGTACTCGGTGAAGATATAACG
ATGCATCCTGGATACATGTCTGAAAAACCGGACGACTATGTGAACCAGGCTGAGTTTATT
AAACAGTTTGAAGAGAAATTGTCGAAAAGGTACAGAAGATTTACCCAGAATACTGAAATG
GAGACAGAAAGTAACAATGAGATAGTAACATCAGGATCTCAACTCGAAGGAACCAAAGAG
ATAAAAAATCAAGAATCAATTGAGACACAGGATATAGAACTGGATATAGAAGAGAAATCG
GATGATAAATAA
Protein sequence:
MEDLDILEKALKNLEATEASEEKASNFESLYKNWGKSGSQEERRKQLLENQKGQRKNKID
NFRGILDLVNAVEESKLFKPYKKVPYRPNIYVSGFHKTCLTYSNVLMLSEWMIEKPNDFA
TNWYVLPCPKGIRLLVVANHGTTKFYTKRGQFKFECNTGLPGGNPYNCYRRNCCVLDCFY
NEKNNTVYLIDMLAWNNQPMTDGETEFRQYWMKTQLEDFPDTKTINKKNKVIIKLLPMMP
CTSQFLSFLLSTYPQFEDNNPPLDGLLFYHKRAHYVAGETPLVGWLYPYMIPEVLGEDIT
MHPGYMSEKPDDYVNQAEFIKQFEEKLSKRYRRFTQNTEMETESNNEIVTSGSQLEGTKE
IKNQESIETQDIELDIEEKSDDK