| New model in OGS2.0 | DPOGS200608 |
|---|---|
| Genomic Position | scaffold3658:- 22437-31305 |
| See gene structure | |
| CDS Length | 1755 |
| Paired RNAseq reads | 1133 |
| Single RNAseq reads | 3087 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008967 (9e-140) |
| Best Drosophila hit | CG10889 (3e-80) |
| Best Human hit | probable ribonuclease ZC3H12C (1e-77) |
| Best NR hit (blastp) | PREDICTED: similar to CG10889 CG10889-PA [Tribolium castaneum] (5e-146) |
| Best NR hit (blastx) | PREDICTED: similar to CG10889 CG10889-PA [Tribolium castaneum] (3e-124) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000571 Zinc finger, CCCH-type IPR021869 Ribonuclease Zc3h12a-like |
| Orthology group | MCL11606 |
Nucleotide sequence:
ATGTCAAACGAAACAGACCTGTCTATATCGGTTCCTCGGTCGTGCTTAACCGAATTTTAC
AGTAAATATCTCCATTTGGTGGAAACTTTTTACTATGTTACGCTTTCTGAAAAGAAATCC
GATGTCGCGAGTGAGCAGTCGGAATATGTGTATTTCAAAGTAACTTTTAATTTAAATCCA
GTTGAGAGCAATTTAATTCCAAGGGAACTTGTGGACAGAATTCAGAAATATGTGGAGTCA
TCATTGGGCTGGACGGGCGAACGTGGTGAAGATTCGAGCTATGACTCCGAGTGTGATGAT
GATGCCAGTCATCGGACCGCCTCTCGCACACCTTCAGACACGCTGGCGGCTGAATTTGCG
GAGTACGTCACGCTTGCGCAACCACAACCCAATCAGGCGAAAATCGAGTTTGCCGTGAAA
CTGGGCTACTCGGAGCGGTTGGCTCGTACCGCGTTGCAGCGGCTCGGTTCAGATCCGCCT
CGGAACGAGCTGTTGGCGGAGCTCATCAAGCTGGCTGCTAAGAGGCCTCCGGGGACCTCC
TCCCCCCCACCTCCGACAGCCTCGCCTCCACCACCCACGGACGACCTCCCCGACAGACCT
CTTAGACACATCGTTATTGATGGAAGCAATGTTGCCATGAGCCATGGCAACAAGGAAGTG
TTCTCGTGTCGCGGCATCGAGATCTGCGTAGACTGGTTCAGAGCAAGGGGTCACAAGGAT
ATAACAGTGTTTGTGCCGAAATGGAGGAAAGAAGCTTCCAGACCGGACAATCCGGTCGCC
GACAGAGACGCTCTCGATAGATTAGAACGGAACCGAGTGCTGGTGTACACGCCCAGTAGA
CTCTTGGGAGGGAAACGTCTCATATGTTACGACGACAGATACATTCTGCGATTAGCGGCA
GAGACGGACGGCATAGTCGTCTCAAACGACAATTACAGAGATCTAGCGGCGGAGAGCCCT
GAATTCAGAAAAGTTGTGGAAGAACGCTTGCTCATGTTCTCCTTCGTCAACGACAGATTC
ATGCCACCGGACGATCCTCTCGGACGATCAGGACCTACTTTGGACACCTTCCTCCGAGCA
CCACCGTCCCGTAACGACGTTCGCTCATACGGTCCGTACGGCCCACCACCTGCTTGTCCT
TACGGAAGGAAATGCACGTACGGGAATAAATGCAAATTCCATCATCCCGAACGAGCCGGA
CGGCCTCACAAATCCGTAGCCGAGAAGTTATCCGAACGTGCCGCTAGGAAGGCGAAAGAT
TTACATACTCTCAGTCTTCCACCGGGAGGTCGACCCGCGGACAGTAAAAGACCTCTGGCC
AGAGCCCATTCTGCCACGCCGCGATTGGCTGACGCTTCGCTGATATCCAATTTCGACAGA
GCCCAAATACCAGGACCCTCGCAGGCAGAGCATAACCCGCACCGCAAACTCGCCAGACAG
CTGACACTCAACCCAACGTGTGACCCGCGACTCCACGCTACAGCGGTTAGAGTATCGTCT
GCCCCAGTGGGCGCGGCCGCGGCCCTACATACTTACAACAACATTTCCCTCTCGCCGTGT
GCCTCCGAGGGCGCCTTGCAGAACTGGGAGGCCCGACGTAGAATGCATTTCCATTTGGCC
GGTGTGTTCCCTGAAGCTCAAGTCGCGGAAGCGATGGCCTCATATCCAGATGAAACTGAC
GCCAAGAAGATGTGCGCTATCATTTTAGACAGATACCGTCCGAGCGAGTCGCTACCACCA
CGGCCTACCCACTGA
Protein sequence:
MSNETDLSISVPRSCLTEFYSKYLHLVETFYYVTLSEKKSDVASEQSEYVYFKVTFNLNP
VESNLIPRELVDRIQKYVESSLGWTGERGEDSSYDSECDDDASHRTASRTPSDTLAAEFA
EYVTLAQPQPNQAKIEFAVKLGYSERLARTALQRLGSDPPRNELLAELIKLAAKRPPGTS
SPPPPTASPPPPTDDLPDRPLRHIVIDGSNVAMSHGNKEVFSCRGIEICVDWFRARGHKD
ITVFVPKWRKEASRPDNPVADRDALDRLERNRVLVYTPSRLLGGKRLICYDDRYILRLAA
ETDGIVVSNDNYRDLAAESPEFRKVVEERLLMFSFVNDRFMPPDDPLGRSGPTLDTFLRA
PPSRNDVRSYGPYGPPPACPYGRKCTYGNKCKFHHPERAGRPHKSVAEKLSERAARKAKD
LHTLSLPPGGRPADSKRPLARAHSATPRLADASLISNFDRAQIPGPSQAEHNPHRKLARQ
LTLNPTCDPRLHATAVRVSSAPVGAAAALHTYNNISLSPCASEGALQNWEARRRMHFHLA
GVFPEAQVAEAMASYPDETDAKKMCAIILDRYRPSESLPPRPTH