New model in OGS2.0 | DPOGS207455  |
---|---|
Genomic Position | scaffold264:- 76957-80139 |
See gene structure | |
CDS Length | 1938 |
Paired RNAseq reads   | 539 |
Single RNAseq reads   | 1791 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001197 (1e-75) |
Best Drosophila hit   | eIF2B-epsilon, isoform A (2e-102) |
Best Human hit | translation initiation factor eIF-2B subunit epsilon (4e-55) |
Best NR hit (blastp)   | translation initiation factor eIF-2B subunit epsilon [Culex quinquefasciatus] (2e-129) |
Best NR hit (blastx)   | eukariotic translation initiation factor 2b, epsilon subunit [Aedes aegypti] (2e-123) |
GeneOntology terms    | GO:0003743 translation initiation factor activity GO:0005829 cytosol GO:0006413 translational initiation GO:0005851 eukaryotic translation initiation factor 2B complex GO:0005085 guanyl-nucleotide exchange factor activity GO:0016779 nucleotidyltransferase activity |
InterPro families    | IPR003307 eIF4-gamma/eIF5/eIF2-epsilon IPR016024 Armadillo-type fold IPR011004 Trimeric LpxA-like IPR016021 MIF4-like, type 1/2/3 |
Orthology group | MCL14766 |
Nucleotide sequence:
ATGGAGAACGACAAGGAAAATGTTGTCCAGGCAGTGGTTGTTATGGATTTATTCAATAAT
AATTTTCTTCCAATAAACAGTGAAAAACCGATGGGACTTCTACAAGTTGCTGGGATACCT
CTTATAGATTATACTTTGGAATCATTATTTCTTGGAGGTGTTGGAGAAGCTTTATTATTT
TGTTGCCAAGATGGAAACAAAATAAAAGATCACATCAAGAAATGTAAAGAAGATAAAGCA
TTATGGAGTACAACCATGGAAGTGCAAGTCGTAATGTCAGACACATGCCAAACAATGGGT
GATGTGATGAGAGAAATAGACGCTGCTGGACTAGTCAGAGGACATTTTGTTCTTTTAGGT
GTTAACTCTATCACTAACATGAATTTTGCTATGCTGTTGGAAAAACATAAGCAAACCTGT
AAAAAAGATAAAGGGGCAGCCATGACAATAGTTTACAAGGAGGTTGCATGGGAACATCCT
TTAATTTATAATGACAATTCAGTGTTGCTAGCGGCAGATGGAAACACACATAAAATATTG
ATGCATGAAAAGCACAAGCCTAAATCAAAGAAAACAACCATTTCTTTACCCTTAGAGTGT
GTATTAAATCATTCTGAGGTGAAATTGCATCATAATTTGGTAGATCCAGGTATTGCTCTC
TGCTCTCCTTCAGTTCCTCCTCTGTTTTCTGATAATTTTGATTTCCAAAATAGAAATGAC
TTTATTTATGGAATTTTGATTAATGAGGATATTTTGGCAAGTTCTCTATATTACGCCTTG
TTGGGGGAAAAACAATATGCAGCAGCTATAACCAATTGGAAAACTTATCAAACAGTATGT
TGGGACATACTCCATAACTGGGTTTATCCGTTATCTATTGAAACTGGATCGTTTTATCAG
AACACATATCTCTCGATGGGAAATCACAATTTCAGAAAAACTGATTCTACTTTAAGCAGA
TCCTGTTCATTACTGGGTGATGTGTTGATTGGAGAAAAAAGTCATATTAGTGATATGACA
AAAATATCTAAATCAATAGTTGGGAATAATTGTATGATAGGAAAAGAGGTTGTTATCCAA
GGCAGTCACCTTATGGACAATGTTATAGTTAAAGATAACACAAGGATAATAAATTCATTC
ATTGACGAGGGTTGTACAATTGAAGACAACTGCAATTTGGAGGGTGTGATTGCCTCTAAC
AAAATATGTATTAAATCGGGAAGCATACTCAAAGGAAATATTCTCGGTGACGAACAATCC
GAAGATGATAGAAAACCTTCTAAATCCACATTAGAAAGTGGTACAGAATGGGAAAATGAA
TCATCCAGGGAAGGAGACGATGAGTTTATCGGGTTCGAGAAAGATTGGAGTGCAAGCGAT
TCTTGTTATTCATCTGAGAGTAGCGTTGAATCATTATCAGACTCACCTATACCTGAGGAC
ACTAATATTTTCCTTCAAGAGGTAATAGACAGTTTAGCCAGGGGCTATGACGACAAACTC
AAATGTGATTTTCTTATATTAGAGATAAATTCATCGAGATATGCATACAACATACAGTTG
CATGAGGTCAACTTTTTTGTTGTGAGGGCTTTACTTAGCTTGCCTGTTTTGGCTGAGAGT
AAGAGTGTACTCAGTTCTGTGAAAGATACAATCAAGTTCTTCCGTCCCGTTCTAGCAAAT
TATATTAAAACAAAATCATCAATAATGGACTGTTTAAAGGCTGTAGAGGAAAGTTGCCTT
AAAAATGAATGGTTAGATGGAAAGGCGGGGCAAGTTATACATTTGCTATATGAAGCAGAT
GTTGTCGATGAAGACTCTTTACTTGAATGGTTTGAGGATTTGAAAGAAAATGAGAGTCCG
CTGATCAATCAAACATCAGTTGTCAAATTTTTTGATTGGCTCCAAGAAGCTAGTGAAGAA
AGTGATGATTCTGATTAG
Protein sequence:
MENDKENVVQAVVVMDLFNNNFLPINSEKPMGLLQVAGIPLIDYTLESLFLGGVGEALLF
CCQDGNKIKDHIKKCKEDKALWSTTMEVQVVMSDTCQTMGDVMREIDAAGLVRGHFVLLG
VNSITNMNFAMLLEKHKQTCKKDKGAAMTIVYKEVAWEHPLIYNDNSVLLAADGNTHKIL
MHEKHKPKSKKTTISLPLECVLNHSEVKLHHNLVDPGIALCSPSVPPLFSDNFDFQNRND
FIYGILINEDILASSLYYALLGEKQYAAAITNWKTYQTVCWDILHNWVYPLSIETGSFYQ
NTYLSMGNHNFRKTDSTLSRSCSLLGDVLIGEKSHISDMTKISKSIVGNNCMIGKEVVIQ
GSHLMDNVIVKDNTRIINSFIDEGCTIEDNCNLEGVIASNKICIKSGSILKGNILGDEQS
EDDRKPSKSTLESGTEWENESSREGDDEFIGFEKDWSASDSCYSSESSVESLSDSPIPED
TNIFLQEVIDSLARGYDDKLKCDFLILEINSSRYAYNIQLHEVNFFVVRALLSLPVLAES
KSVLSSVKDTIKFFRPVLANYIKTKSSIMDCLKAVEESCLKNEWLDGKAGQVIHLLYEAD
VVDEDSLLEWFEDLKENESPLINQTSVVKFFDWLQEASEESDDSD