| New model in OGS2.0 | DPOGS207461 |
|---|---|
| Genomic Position | scaffold264:- 7171-12673 |
| See gene structure | |
| CDS Length | 1551 |
| Paired RNAseq reads | 160538 |
| Single RNAseq reads | 483742 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001202 (0.0) |
| Best Drosophila hit | muscle LIM protein at 84B, isoform B (1e-179) |
| Best Human hit | cysteine and glycine-rich protein 2 (8e-32) |
| Best NR hit (blastp) | muscle LIM protein isoform 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | muscle LIM protein isoform 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0005737 cytoplasm GO:0007519 skeletal muscle tissue development GO:0030154 cell differentiation GO:0005515 protein binding GO:0008270 zinc ion binding GO:0008307 structural constituent of muscle GO:0045214 sarcomere organization GO:0030018 Z disc |
| InterPro families | IPR001781 Zinc finger, LIM-type |
| Orthology group | MCL11070 |
Nucleotide sequence:
ATGCCTTTCAAACCCGCAGACAACCCCAAATGTCCGAAATGTGGCAAATCCGTGTACGCC
GCAGAAGAGCGCGTCGCTGGAGGGCTCAAATGGCACAAGATGTGCTTCAAATGTGGTCTG
TGCCAAAAGTTGCTGGACTCCACTAACTGCTCAGAACACGAAGGTGAACTTTACTGTAAA
GTATGCCACGCCCGCAAATTCGGACCCAAAGGTTACGGCTTTGGCGGTGGTGCCGGCTGC
CTGTCCATGGACACCGGTGACCATCTGAAAGCTGAGAACGCGGGCGTACGAACTAATGGA
GCCTGCTTGGAGTCACGTGTAATAGCTAAGGCTCCCCCGGGCGAAGGATGTCCACGATGC
GGCGGATGTGTATACGCTGCCGAGCAAATGTTGGCTCGTGGACGGGCGTGGCATAAGGAG
TGCTTCAAGTGCGGTGACTGCCAAAAGCGTTTGGACTCCACCAACTGTTGCGAGGGCTCA
GACAAAGATATTTACTGCAAAGTGTGTTATGGAAAGAAGTTTGGGCCTAAAGGATATGGT
TATGGCAAGGGAGCAGGTGTCCTGCAGAGTGACCCTTACGCCAATGGGGGTGTTGGACAC
GGGGGAATATCGTCCTTGGGACTAGTATGTGATTTAAAGGACAAGGAATGGCAGAGCGAT
CTTGCACCGAGGACAACGGTGATTGACACAGCCGCTATTAAGGCTCCTCCTGGTAAAGGA
TGCCCAAGATGCGGTGGCGTCGTCTTCGCCGCGGAACAGGTCCTAGCTAAGGGTCGTGAA
TGGCATCGCAAGTGTTTCAAATGCCGCGATTGCCACAAGACCTTGGATTCTATCATCGCT
TGTGATGGTCCCGATTCCGATGTTTACTGCAAGACTTGCTACGGAAAGAAATGGGGACCT
CACGGCTACGGTTTCGCCTGTGGTTCTGGATTCCTACAAACCGACGGCTTGACCGAGGAA
GAAATTTCTGCAAACCGCCCATACTACAATCCAGACACTACGTCAATCAAGGCTCCCAAG
GGCCAGGGTTGCCCAAGATGTGGTGGTATGGTATTTGCAGCTGAACAACAACTGGCTAAG
GGAACGATGTGGCATAAGAAGTGTTTCAACTGTGCTGAATGCCACCGTCCATTGGACTCC
ATGCTGGCATGTGATGGCCCCGACAAGGAGATCCACTGTCGTGCTTGCTATGCAAAACTA
TTCGGGCCCAGAGGCTTTGGATATGGTCACGCCCCTACTCTAGTGTCCACTGACACTGAT
CCACATGTCACTTACACTGAACAAATGCCCTTCACGGGTCCAAAGGCAGCCAAGGGTCAG
GGCTGCCCTCGATGTGGATTCCCTGTATATGCTGCTGAACAGATGAACTCTAAAAATGGC
ACATGGCACAAGCGGTGCTTCTCATGTGCAGACTGCCATAGATCTCTTGATTCCACTAAC
TTGTGTGATGGGCCCAATGGTGAAATTTACTGTCGTGGATGCTACGGTCGCAACTTCGGA
CCCAAAGGTGTTGGATTCGGATTGGGTGCAGGCACATTGACCATGGCTTAA
Protein sequence:
MPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK
VCHARKFGPKGYGFGGGAGCLSMDTGDHLKAENAGVRTNGACLESRVIAKAPPGEGCPRC
GGCVYAAEQMLARGRAWHKECFKCGDCQKRLDSTNCCEGSDKDIYCKVCYGKKFGPKGYG
YGKGAGVLQSDPYANGGVGHGGISSLGLVCDLKDKEWQSDLAPRTTVIDTAAIKAPPGKG
CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCHKTLDSIIACDGPDSDVYCKTCYGKKWGP
HGYGFACGSGFLQTDGLTEEEISANRPYYNPDTTSIKAPKGQGCPRCGGMVFAAEQQLAK
GTMWHKKCFNCAECHRPLDSMLACDGPDKEIHCRACYAKLFGPRGFGYGHAPTLVSTDTD
PHVTYTEQMPFTGPKAAKGQGCPRCGFPVYAAEQMNSKNGTWHKRCFSCADCHRSLDSTN
LCDGPNGEIYCRGCYGRNFGPKGVGFGLGAGTLTMA