| New model in OGS2.0 | DPOGS207477 |
|---|---|
| Genomic Position | scaffold264:+ 91266-101680 |
| See gene structure | |
| CDS Length | 3930 |
| Paired RNAseq reads | 2438 |
| Single RNAseq reads | 6835 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000950 (0.0) |
| Best Drosophila hit | tho2, isoform A (0.0) |
| Best Human hit | THO complex subunit 2 (0.0) |
| Best NR hit (blastp) | THO complex subunit 2 (Tho2) [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to tho2 CG31671-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0006406 mRNA export from nucleus |
| InterPro families | IPR021418 THO complex, subunitTHOC2, C-terminal IPR021726 THO complex, subunitTHOC2, N-terminal |
| Orthology group | MCL12478 |
Nucleotide sequence:
ATGGGATCGTTTAATAAATTTGTATCTGATTATTGTAAAGCATGGGAAAAATCTGGACGG
GAGCAATTCTTAAAAGCAATTACCCAGTTTATAAAGGATGAAGCAAAGAGTCCCTTGTTT
TCCAAGTCAAACAAGCTATCAGGATTGTCACAAACGATCTATGATCTTTTACTTTGTGGT
CTTCGTGGTGTCTTGAAAAAGGATTCTGTAATATCTGTGTTGAAAGATATTGTTGGTGTA
CATGCAGACATACCATCAATATTACTAGATGTAGTTTGTGTTCTGGATTCAGAAACATCT
CTTGATGTCCAGAATGAAGAGAGAAGTAATTTTTGCTATTTAGTTAGGGAGTTGGAGTCG
TTTATATCAGATAAACTCCTGAAGGAGCGTTTAGAGATTGACACCCTGCAGGATGTTGGT
ACACTGAAGAATAAGAATTTTTATACTAAGTTTATTAAAATCAAAACTAAACTATATTAT
AAGCAACGTAAGTTCAACCTTTTTAGAGAAGAAAGTGAAGGCTATTCAAAACTAATAGTT
GAATTAAACCAAGAAATATCCGAAGATACAGATTGGAAGACAATATTAGAAATCATTCAG
TCTCTCATAGGTTGTTTCAACTTGGACCCAAACAGAGTCTTAGATATAATTTTAGAATCA
TTTGAAGCTCGACCTCACTTAGACAAACTATTTATTTCATTAATAAAAAATTACATGGGC
GATGCTCAAGTGATTTGTGAAGTATTAGGATTTAAGCTCGGCGATATGGAAGTATTAGAA
AATTGTAAAAGCCCACCATCATTAATGACTGTCATTGCACTGCTTTTACAACATGAAGTT
ATATCTCTGGACGATATTTACCCCTGGCTACGTCCAGATGATACGGTCATGGCCAAGGAA
GCTGACAAAGAATTTAAAGCTGTGCAGGATTATATTCGTAGACTTAATATTGTATCTACA
AAGGGACCACAGAGTAATGCACCTGCAGAGTTTATCGAAGAAAAAGCTGATCCACAGGAA
TACTGGAACAATCAGAAACTAGTACTCTGTGAAGAGCTCCTAAATGTGAGAGCATGGAAG
GAATTTTCATCACTTTTTTCAAGATTGTCAGTTACTTGCGTACCGCAAAGGCCTGCTATA
GCTTTGTGCAGCATGCTTCACGCTTTGATTGAACCTTTGTACAGAATACATTGTCGAGTA
GCTCCTAAAATAATAGGTAAGCCTATACCACCTTTGAAGTCTCCTTTGGCACCGCCAGCG
TGCAAGACTTTTGAAGATATGAAGGAAACTGTCATACCAGCTCTGATGATGTTGGGTCCA
TCCCTTCATTATGATCCTATTTTAATGTACAAAATAATTCGTGTTCTGAGAACTGCTCGA
TCTCTGAAAGAGGATCCTTTGCATCATGAAGCACTTACAGTGCTGGATACAGCAATACTA
CCAGCATTAAGTCTGATGGAGGGAAATTGTTGCATGGCTGAAGAAGTTTACACCTTGCTT
AAGTTATACCCTTACCAATGCAGATACTGTTTATACGCGAGGTGGAAAAACGAATCCGGT
GAGAAGATCCCGTCGCTGATGCGTGTTCGGGGCAACTCCTTGCAGCGTATAAAACATATT
ATGAAGCGAGTGTCCAAGGAGAACATCAAACCCCAGGGACGTCTCATAGGCAAGCTGTCA
CACGCTGCACCGGCTTTCCTGTTCGATTACATGCTGCTACAAATACAAACCTATGACAAC
CTCATTGGTCCGGTGGTGGAATCTCTGAAGTATTTAACATCCCTCTCCTTGGACATTCTG
GGCTATTGTCTCGTTGAAGCTCTTGCGGCCCGTAAGGGTACCGTGGGAGCCGCACATCCA
CCAGCTCTTCAAGCGCTCGCGGCATTCGCTGCAGCGGCTTTCAAGAAACATAATATAGAA
TTGACGGCATTGCTGCAATTTGTAGCAAATAGGCTTAAAGCGCAGCAGAGTCACGATCTT
CTGATTCTGAAGGAAATAGTGCAAAAAATGGCGGGAATAGAAGCCGCTGAGGAAATGACT
CCGGAACAACTCGATGCCATGGCCGGCGGAGAGCTGCTGAAAGGAGAGGCCGGTTATTTC
TCTCAAGTACGTAACACGAGAAGATCGTCGGCGAGACTGAAAGAGGCCGTGGTGGGAAAT
AATTTGGATATTGCTCTATGTATACTGTCCGCTCAGCAGAGACATTGTTGTGTATGGAAA
GAGTACGCTGAGGATAGTCCATCTAGTGGTGAGCCACGCGGGTCTCAGCTTAAAGTGGTC
GGTCGTCTTGCGGACCAGTGTCAAGACGCGCTTGTCCAACTGGGTACCTTCCTCGCTTCC
TCGCACGCGCCTGATGAATACGCCGCTAGACTTCCACTTCTACAAGAACTACTCCGAGAC
TATCACGTAGACGCCGATGTGGCGTTCTTCCTCCACCGTCCGGTGCTCAGTCAAAAAATA
GCAGCCAAGGCTGAAGCTCTACGAAAAAGCTCCGACAGCAGAAGCGAGTCATTAGAGAGA
AGTATAGAGAGATACAACATAGCTTCTAAAGAGGCGCTGGAACCTATCGTGACGTCGATA
ACTCCCCTACTACCGTCCAGAGTCTGGGAAGATATATCTCCCGAGTTCTATGTGACTTTT
TGGTCCTTGTCCATGTACGACCTTCGCGTGCCCGTCGAGAGTTACGAGAGGGAGATAGAT
CGCTTGAAAACGGCCGCTGCTAATGTAGCCAAAGACAGCTCACAAGGTACCAAAGGAAAA
AAGGAACAGGAACGGTTTAACACTCTCATTGATAAGTTGCAAGAAGAGCGTCGTCGTCAA
GAAGAGCACGTGGCGCGGGTCCGCGGTCGCTTGCAGCGCGAGTGCGTCGCTTGGTTCCCA
GCTCGTGCGGCGAAATCAGCCAAGAACGAGACTGTGACGCGTTTGATGCAACTCTGCATC
TTCCCTCGCTGCATCTTCACGGCCCCGGACGCCTTGTACTGCGCCGAGTTCGTCCACACA
GTCCACGCACTCAAGACGCCTAATTTCTCAACGCTCCTGTGCTATGACCGGTTGTTCTGC
GACATCACGTACTCGGTGATGTCGTGTACGGAGGGCGAGGCAGCTCGCTACGGTCAGTTC
CTGTGCCGTGTGATGAGGACGGCCATGCGCTGGCACAGAGACCGTACGGCCTTCCACGAG
GAGTGCGCGCACTACCCGGGCTTCGTCACCAAGTACAGAGTGTCCAATCAGTTCACTGAA
GCCAACGATCACGTCGGATACGAGAACTACCGGCACGTGTGTCACAAGTGGCACTACAAG
ATCACCAAAGCGATGGTGGTGTGTCTCGACTCCGGGGACTACGTGCAGATAAGAAACGCT
CTGATAGTACTCATACGAGTGTTGCCGCACTTCCCCGTGCTAGAGAAACTCGCACAGATC
ATTGAGAAGAAAGTTGAAAAGGTCAAAGAGGAAGAGAAAACACAACGACAGGACCTGTAC
GTGCTCGCGACGGGTTACAGCGGCCAACTGAGGAACAAGGTGCCTCATATGATGAAGGAG
AGCGACTTCCATCAGATCGTTCATCTCACGACCGGGGAAGTTAAACCCAGGGAGCAGACG
ACCGACGTGCCCGCACCAGATAATGAGAAGAAAGAATCGAGAACAAGCGAGAGACGCCGC
GACGATACTGATCGTGAGAAGGAGGTCAAGCGCGAATCTCGTTCAAACGCCAAGGAGAGA
AACAAAGAAGATGGCAGGACTAAAGACAGATCACCGAGAGAGAGGTCGCACAGAGAGGAA
CGCTACCTGGACACGGTGTCGCCGCCTCATGAACACCGTCATCCGCCCGATGACATAGAT
CGTGATGTGAAACGTCGTAAAGTCGAAAGCAGCGGTAACGGCAAGGTGAGTATCGTTGTG
TATCCTCGGACCAAACTCGCGCCGGACTGA
Protein sequence:
MGSFNKFVSDYCKAWEKSGREQFLKAITQFIKDEAKSPLFSKSNKLSGLSQTIYDLLLCG
LRGVLKKDSVISVLKDIVGVHADIPSILLDVVCVLDSETSLDVQNEERSNFCYLVRELES
FISDKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIV
ELNQEISEDTDWKTILEIIQSLIGCFNLDPNRVLDIILESFEARPHLDKLFISLIKNYMG
DAQVICEVLGFKLGDMEVLENCKSPPSLMTVIALLLQHEVISLDDIYPWLRPDDTVMAKE
ADKEFKAVQDYIRRLNIVSTKGPQSNAPAEFIEEKADPQEYWNNQKLVLCEELLNVRAWK
EFSSLFSRLSVTCVPQRPAIALCSMLHALIEPLYRIHCRVAPKIIGKPIPPLKSPLAPPA
CKTFEDMKETVIPALMMLGPSLHYDPILMYKIIRVLRTARSLKEDPLHHEALTVLDTAIL
PALSLMEGNCCMAEEVYTLLKLYPYQCRYCLYARWKNESGEKIPSLMRVRGNSLQRIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYMLLQIQTYDNLIGPVVESLKYLTSLSLDIL
GYCLVEALAARKGTVGAAHPPALQALAAFAAAAFKKHNIELTALLQFVANRLKAQQSHDL
LILKEIVQKMAGIEAAEEMTPEQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKEAVVGN
NLDIALCILSAQQRHCCVWKEYAEDSPSSGEPRGSQLKVVGRLADQCQDALVQLGTFLAS
SHAPDEYAARLPLLQELLRDYHVDADVAFFLHRPVLSQKIAAKAEALRKSSDSRSESLER
SIERYNIASKEALEPIVTSITPLLPSRVWEDISPEFYVTFWSLSMYDLRVPVESYEREID
RLKTAAANVAKDSSQGTKGKKEQERFNTLIDKLQEERRRQEEHVARVRGRLQRECVAWFP
ARAAKSAKNETVTRLMQLCIFPRCIFTAPDALYCAEFVHTVHALKTPNFSTLLCYDRLFC
DITYSVMSCTEGEAARYGQFLCRVMRTAMRWHRDRTAFHEECAHYPGFVTKYRVSNQFTE
ANDHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLPHFPVLEKLAQI
IEKKVEKVKEEEKTQRQDLYVLATGYSGQLRNKVPHMMKESDFHQIVHLTTGEVKPREQT
TDVPAPDNEKKESRTSERRRDDTDREKEVKRESRSNAKERNKEDGRTKDRSPRERSHREE
RYLDTVSPPHEHRHPPDDIDRDVKRRKVESSGNGKVSIVVYPRTKLAPD