| Genomic Position | scaffold1283:- 25634-31268 |
|---|---|
| See gene structure | |
| CDS Length | 1524 |
| Paired RNAseq reads | 66 |
| Single RNAseq reads | 385 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000112 (4e-47) |
| Best Drosophila hit | CG4537 (3e-30) |
| Best Human hit | cysteine-rich PDZ-binding protein (1e-37) |
| Best NR hit (blastp) | PREDICTED: similar to postsynaptic protein CRIPT [Apis mellifera] (5e-42) |
| Best NR hit (blastx) | PREDICTED: similar to Cysteine-rich PDZ-binding protein (Cysteine-rich interactor of PDZ three) (Cysteine-rich interactor of PDZ3) [Tribolium castaneum] (9e-43) |
| GeneOntology terms | GO:0005515 protein binding GO:0005737 cytoplasm GO:0019904 protein domain specific binding GO:0030054 cell junction GO:0042995 cell projection GO:0043197 dendritic spine GO:0045202 synapse GO:0045211 postsynaptic membrane |
| InterPro families | IPR019367 PDZ-binding protein, CRIPT |
| Orthology group | MCL12693 |
Nucleotide sequence:
ATGGTTTGTGATAAATGCGAGAAAAAACTTGGTCGCGTCATCACCCCTGATCCTTGGAAG
ACGGGAGCTCGTAATACTGTGGAGTCTGGTGGTAGGAAAGTCGGTGAAAACAAAGCGCTA
ACAGCCAAAAAAGCGAGATATAATCCATATACCTCAAAATTTTATGAATGCAAGATTTGC
CGAACAAAAGTCCATCAAGTTGGTTCACACTACTGTCAAGCTTGCGCTTACAAGAAGGGA
ATATGTGCTATGTGTGGAAAGAAAATACTGGACACTTCAAATTATAGGCAGAAAACCGAA
AGAAATTATGAACAATTATTGAAACAGCTAAAAAATATTTTAACTTTTGCATTAAAGGGT
ATGGATAATAGTCACGCAAATGATATTAAAAGATTTGATGGACAAAAAAACTGGAATCAA
CGACGAAATTCAAATGACAATACTTATGTCAACTCAAGTAACTCGTCCGAAGACATGTCA
GATCAGTCCTTAAACTTTAGATATGAACATGATAGTTGTGAGCGAGGAAGGAGGAAATGC
GTTAAAGCCTGTAAATCGGCTTACAGGGAGGCCTGTTATTTGGAAGGTTGTCCTGAAATA
CTGCTAGGAGTAAATAATGAATACAGCGAGAAAAGCAAAACAACTGAAAAAGGCACTACC
ATATATTCTATAGCTGATGTACTGCAAACACTGTTGAAACTAAACGAGGCCAGATACAAC
ACATTCAAAAAACTTAATTCACTAAACAATATACATTACATGAGAACTTTCAGTGAGAAA
GAAAATGAAAATAATATTTGGGAAACTTTTCTGGAAATAGCGACATTTTTCAAGCTGTCA
TTTAAACCAAATCTTGAGAAAGACGAGGAACAAAATATTCGTTATTACGACGTGTATCAC
GACGATAAATATATATTCACAATCCCAGTACCGAAGAGTATGGACTTAAAGAAAGTTCTT
AGCTTGCCCGCTCCATCCGACGACAAAAACACTGATGTGAAAAAGAATAGCAGTCTTAGA
CACTACACGTGCAGGCGAGGCGATAAAAGATGTAAATCAGCTTGCAGGGAAGCCCTGATG
ATGGCTTGCATTATACTTCCTAGATTATATTCGTCTAAAATTTATTTAAATCCTCTAGAT
GTAGAAGATGTCTATGGGTCAAATAACAATGAGGAAGTGATTGTAGTGTCTGTTAAAGAT
CCGCTGAGAAGTAAGAATTTAAAGATAGAAGGTTTAGAACCGTCTAAATCGTTGGTAATA
AAGAATGTAAAATCGGCGAAAAATGATTTCGCGGTAGAAGGTTTGAAACTAAATGACGCA
CAAAAAAATATTTTAAGAAAAAGATGGCAGAGCTCCTGCGACAGGAAGGCGTCGAAAGTT
TGTATACAAGCTTGCAAAAACACAGCTAAATCTATATGCAGCTCGTACAAATGTAGAAAA
AGTATGAAGCGGAGTTTTAAAAAGGAATGTAAAAGGAATTGCAAATCAAAATTTCTCTCT
GCTAAGGATACTGATACTGAATAA
Protein sequence:
MVCDKCEKKLGRVITPDPWKTGARNTVESGGRKVGENKALTAKKARYNPYTSKFYECKIC
RTKVHQVGSHYCQACAYKKGICAMCGKKILDTSNYRQKTERNYEQLLKQLKNILTFALKG
MDNSHANDIKRFDGQKNWNQRRNSNDNTYVNSSNSSEDMSDQSLNFRYEHDSCERGRRKC
VKACKSAYREACYLEGCPEILLGVNNEYSEKSKTTEKGTTIYSIADVLQTLLKLNEARYN
TFKKLNSLNNIHYMRTFSEKENENNIWETFLEIATFFKLSFKPNLEKDEEQNIRYYDVYH
DDKYIFTIPVPKSMDLKKVLSLPAPSDDKNTDVKKNSSLRHYTCRRGDKRCKSACREALM
MACIILPRLYSSKIYLNPLDVEDVYGSNNNEEVIVVSVKDPLRSKNLKIEGLEPSKSLVI
KNVKSAKNDFAVEGLKLNDAQKNILRKRWQSSCDRKASKVCIQACKNTAKSICSSYKCRK
SMKRSFKKECKRNCKSKFLSAKDTDTE