| New model in OGS2.0 | DPOGS208750 |
|---|---|
| Genomic Position | scaffold3864:- 1815-3707 |
| See gene structure | |
| CDS Length | 753 |
| Paired RNAseq reads | 21000 |
| Single RNAseq reads | 62614 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003337 (1e-102) |
| Best Drosophila hit | ribosomal protein L10Ab, isoform A (3e-87) |
| Best Human hit | 60S ribosomal protein L10a (6e-80) |
| Best NR hit (blastp) | ribosomal protein L1 [Lonomia obliqua] (3e-120) |
| Best NR hit (blastx) | ribosomal protein L1 [Lonomia obliqua] (2e-105) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0022625 cytosolic large ribosomal subunit GO:0003723 RNA binding GO:0006396 RNA processing GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR002143 Ribosomal protein L1 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich |
| Orthology group | MCL14727 |
Nucleotide sequence:
ATGGTTGGTGGCAACATGATCCGGAAATTACTTCTAGCTCTTGGCATAAAACATTTCCAA
GACGACCCCAACCAACATCACCGAATACGCTTATTTTGGATATTGTCGAAAGTATCTCGT
GATACTCTATATGAGTGCGTCAATGCCGTACTCCAATCGTCGAAAGACAAGAAACGTAAC
TTCTTGGAGACAGTGGAACTCCAAATTGGTCTCAAGAACTATGACCCCCAAAAGGACAAG
CGTTTCTCCGGCACCGTCAAGCTAAAGTACATCCCTAGACCCAAGATGCAAGTTTGTGTT
CTTGGAGACCAGCAACATTGTGATGAAGCTAAGTCACTGACTGTACCATGCATGGATGCT
GAAGCTCTTAAGAAACTTAACAAGAACAAGAAACTGGTTAAGAAACTAGCTAAGAAATAC
GACGCTTTCTTGGCATCTGAATCCCTCATCAAGCAGATTCCCCGTCTCCTTGGTCCGGGT
CTGAACAAGGCCGGAAAGTTCCCTGGTCTTCTCTCCCACCAGGAGTCAATGACACAAAAG
ATTGATGAGGTCAAAGCTACCATCAAATTCCAAATGAAAAAGGTACTCTGTCTCTCTGTG
GCCGTCGGTCATGTTGATATGACACAGGACGAACTTGCACAGAATGTGCATCTGTCGATC
AATTTCTTGGTGTCACTTCTGAAGAAGCACTGGCAGAATGTGAGGTCACTTCACATGAAG
TCCACTATGGGACCACCCCAGAGATTGTACTAA
Protein sequence:
MVGGNMIRKLLLALGIKHFQDDPNQHHRIRLFWILSKVSRDTLYECVNAVLQSSKDKKRN
FLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKSLTVPCMDA
EALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQK
IDEVKATIKFQMKKVLCLSVAVGHVDMTQDELAQNVHLSINFLVSLLKKHWQNVRSLHMK
STMGPPQRLY