| New model in OGS2.0 | DPOGS201041 |
|---|---|
| Genomic Position | scaffold4317:+ 274-6517 |
| See gene structure | |
| CDS Length | 636 |
| Paired RNAseq reads | 989 |
| Single RNAseq reads | 2535 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012485 (2e-77) |
| Best Drosophila hit | CG11899 (3e-56) |
| Best Human hit | phosphoserine aminotransferase isoform 2 (8e-53) |
| Best NR hit (blastp) | phosphoserine aminotransferase 1 [Bombyx mori] (6e-84) |
| Best NR hit (blastx) | phosphoserine aminotransferase 1 [Bombyx mori] (5e-81) |
| GeneOntology terms | GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity GO:0008615 pyridoxine biosynthetic process GO:0006564 L-serine biosynthetic process GO:0003824 catalytic activity GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR000192 Aminotransferase, class V/Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Orthology group | MCL14045 |
Nucleotide sequence:
ATGGTTAAAATACACAATTTCGGTGCTGGGCCAGCCAAGTTGCCAGAGGAAGTGTATGAA
ATATTAAAACAAGAATTGACCAACTTTGAAGGGACAGGGATCAGTTTATTGGAGACGAGT
CATCGTACGCCTGCTTACGCTAAATTAAATAAGGATGTACAAGATGTTGTGAGAAAGTTG
TTAAATGTCCCGAACAACTACAAAATACTATTTCTATCTGGCGGCGGTCAGGGACAATTT
GCTGCGGTGCCACTAAATTTAATATCACGTACTGGTTCAGCCGACTATGTAGTGACTGGT
GCCTGGTCAGCAAAAGCCGCAAAGGAAGCGAAGAAGTACGGTAAGGTGAATCTGGTATTA
CCACCTACTGACCGTTACGTGGAAATCCCAGATCAGTCAACTTGGAAACTCGACCCCAAC
GCTTCCTACGTCCATATTTGCACCAATGAGACGATTCACGGAATAGAATTTGATTTTATC
CCGGACACTAAAGTTGTCCCACTGGTTGCTGATATGTCTTCCAATTTTATGTCCAAGAAA
ATTGATGTTTCTAAAGTTGGGCTGCAATTAAACGGTGAATGTGTTAATCCACTTGTCATT
ATAAAATTAAACCTAATAATAAAGCTAGTAGAGTAG
Protein sequence:
MVKIHNFGAGPAKLPEEVYEILKQELTNFEGTGISLLETSHRTPAYAKLNKDVQDVVRKL
LNVPNNYKILFLSGGGQGQFAAVPLNLISRTGSADYVVTGAWSAKAAKEAKKYGKVNLVL
PPTDRYVEIPDQSTWKLDPNASYVHICTNETIHGIEFDFIPDTKVVPLVADMSSNFMSKK
IDVSKVGLQLNGECVNPLVIIKLNLIIKLVE