Genomic Position | scaffold925:+ 51949-53576 |
---|---|
See gene structure | |
CDS Length | 1254 |
Paired RNAseq reads   | 3 |
Single RNAseq reads   | 18 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009954 (5e-09) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (3e-144) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (3e-138) |
GeneOntology terms    | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGACGGACAAGAAGCTCATATTCAGAGACGTCTCCGTGATCAACAGGTTTAATACCGGT
AGTGATCACCGACTGGTACGAGGCTCTCTGAATATAGACTTTAAGGCTGAACGTGTCCGC
CTGATGAAATCCAGGCTCCGACCTACCCTGCTCCATTCCATAATAAGATCCGAAACGTTC
CAGTCAAATCTGGATAACCGATTGTTGGGAATGTGGTTCGGATGCTCAGGGAAGAGGATA
CGAGTTTCTGTGCAACGCAGCGGGTGGAGTAGGGGTGTGGTCATCCTGTTCTTCAAAAAG
GGAGACAAATCCCTGCTGAAGAACTGTCGATCCATTTCCCTGCTAAGCCACGTCTATAAG
CTGTTTTTAAGAGTGATAACAAACTGTCTTGCGCTAAGACTCAACGAATTCCAACCACCG
GAACAGGCTGGGTTTCAGAGCGGATACGGCACCATAGACCACATTCACACGGTGATGCAG
ATTATACAGAAGATCGAAGAGTATAATCAGCCCCTTTGTCTAGCATTCGTCGACTATGGG
AAAGCTTTTGACTCGATTGAAACCTGGTCTGTTCTGGAGTCCCTGCAGCGTTGCCAAGTT
GATTGGTGGTATATCCAAGTGATAAGATGTCTCTACGAAGCCGCCACCATGTCCGTCCAA
GTACAGAATCAGCAAACAAGTCCCATACCGGTGCATCGAGGAGTGAGACAAGGGGACGTT
ATCTCCCAGAAATTGTTCACAAATGCAATGGAGGATATGTTTCAGACGCTGCGCTGGAAA
GGACGGGGTATCAACATCAATGGCAAATACATCTCTCACTTGCGATTTGCAGGCGACATC
GTCATTATGGCAGAAACGCTGCAGAACCTACAACAGATGCTTGATGACCTGGCTGACTCT
TCTATACGCCTCGGCCTACGGATGAACTTGGCCAAAACCAAGGTCATGTTCAATGAACAT
GTTCTACCGGGACCGATTGCAGTCCATGGTGTCGTTCTCGAAGTTGTTCAAAAATATGTC
TATCTGGAGCAAGTATTGCAGTTGGGTAGAAATAATTTCGAGGAAGAGGTGAGTAGAAGA
GTTCAGCTGGGTTGGGCAGCGTTTGGGAAGTTACGCCGAGTCTTAACATCGTTGATCCCA
CAATGCCTGAAGACGAAAGTCTTCAATCAGTCTAAAATCCTACCCGTAATGACTTACGGT
GCCGAAACGTGGACACTAACGGTACGGCTACTTCACCAACTCAAAGACGCTTAG
Protein sequence:
MTDKKLIFRDVSVINRFNTGSDHRLVRGSLNIDFKAERVRLMKSRLRPTLLHSIIRSETF
QSNLDNRLLGMWFGCSGKRIRVSVQRSGWSRGVVILFFKKGDKSLLKNCRSISLLSHVYK
LFLRVITNCLALRLNEFQPPEQAGFQSGYGTIDHIHTVMQIIQKIEEYNQPLCLAFVDYG
KAFDSIETWSVLESLQRCQVDWWYIQVIRCLYEAATMSVQVQNQQTSPIPVHRGVRQGDV
ISQKLFTNAMEDMFQTLRWKGRGININGKYISHLRFAGDIVIMAETLQNLQQMLDDLADS
SIRLGLRMNLAKTKVMFNEHVLPGPIAVHGVVLEVVQKYVYLEQVLQLGRNNFEEEVSRR
VQLGWAAFGKLRRVLTSLIPQCLKTKVFNQSKILPVMTYGAETWTLTVRLLHQLKDA