DPGLEAN05339 in OGS1.0

Genomic Positionscaffold925:+ 51949-53576
See gene structure
CDS Length1254
Paired RNAseq reads  3
Single RNAseq reads  18
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA009954 (5e-09)
Best Drosophila hit  ND
Best Human hitND
Best NR hit (blastp)  endonuclease-reverse transcriptase [Bombyx mori] (3e-144)
Best NR hit (blastx)  endonuclease-reverse transcriptase [Bombyx mori] (3e-138)
GeneOntology terms



  
GO:0003964 RNA-directed DNA polymerase activity
GO:0006278 RNA-dependent DNA replication
GO:0005622 intracellular
GO:0008270 zinc ion binding
GO:0003723 RNA binding
InterPro families  IPR000477 Reverse transcriptase
Orthology groupMCL10020

Nucleotide sequence:

ATGACGGACAAGAAGCTCATATTCAGAGACGTCTCCGTGATCAACAGGTTTAATACCGGT
AGTGATCACCGACTGGTACGAGGCTCTCTGAATATAGACTTTAAGGCTGAACGTGTCCGC
CTGATGAAATCCAGGCTCCGACCTACCCTGCTCCATTCCATAATAAGATCCGAAACGTTC
CAGTCAAATCTGGATAACCGATTGTTGGGAATGTGGTTCGGATGCTCAGGGAAGAGGATA
CGAGTTTCTGTGCAACGCAGCGGGTGGAGTAGGGGTGTGGTCATCCTGTTCTTCAAAAAG
GGAGACAAATCCCTGCTGAAGAACTGTCGATCCATTTCCCTGCTAAGCCACGTCTATAAG
CTGTTTTTAAGAGTGATAACAAACTGTCTTGCGCTAAGACTCAACGAATTCCAACCACCG
GAACAGGCTGGGTTTCAGAGCGGATACGGCACCATAGACCACATTCACACGGTGATGCAG
ATTATACAGAAGATCGAAGAGTATAATCAGCCCCTTTGTCTAGCATTCGTCGACTATGGG
AAAGCTTTTGACTCGATTGAAACCTGGTCTGTTCTGGAGTCCCTGCAGCGTTGCCAAGTT
GATTGGTGGTATATCCAAGTGATAAGATGTCTCTACGAAGCCGCCACCATGTCCGTCCAA
GTACAGAATCAGCAAACAAGTCCCATACCGGTGCATCGAGGAGTGAGACAAGGGGACGTT
ATCTCCCAGAAATTGTTCACAAATGCAATGGAGGATATGTTTCAGACGCTGCGCTGGAAA
GGACGGGGTATCAACATCAATGGCAAATACATCTCTCACTTGCGATTTGCAGGCGACATC
GTCATTATGGCAGAAACGCTGCAGAACCTACAACAGATGCTTGATGACCTGGCTGACTCT
TCTATACGCCTCGGCCTACGGATGAACTTGGCCAAAACCAAGGTCATGTTCAATGAACAT
GTTCTACCGGGACCGATTGCAGTCCATGGTGTCGTTCTCGAAGTTGTTCAAAAATATGTC
TATCTGGAGCAAGTATTGCAGTTGGGTAGAAATAATTTCGAGGAAGAGGTGAGTAGAAGA
GTTCAGCTGGGTTGGGCAGCGTTTGGGAAGTTACGCCGAGTCTTAACATCGTTGATCCCA
CAATGCCTGAAGACGAAAGTCTTCAATCAGTCTAAAATCCTACCCGTAATGACTTACGGT
GCCGAAACGTGGACACTAACGGTACGGCTACTTCACCAACTCAAAGACGCTTAG

Protein sequence:

MTDKKLIFRDVSVINRFNTGSDHRLVRGSLNIDFKAERVRLMKSRLRPTLLHSIIRSETF
QSNLDNRLLGMWFGCSGKRIRVSVQRSGWSRGVVILFFKKGDKSLLKNCRSISLLSHVYK
LFLRVITNCLALRLNEFQPPEQAGFQSGYGTIDHIHTVMQIIQKIEEYNQPLCLAFVDYG
KAFDSIETWSVLESLQRCQVDWWYIQVIRCLYEAATMSVQVQNQQTSPIPVHRGVRQGDV
ISQKLFTNAMEDMFQTLRWKGRGININGKYISHLRFAGDIVIMAETLQNLQQMLDDLADS
SIRLGLRMNLAKTKVMFNEHVLPGPIAVHGVVLEVVQKYVYLEQVLQLGRNNFEEEVSRR
VQLGWAAFGKLRRVLTSLIPQCLKTKVFNQSKILPVMTYGAETWTLTVRLLHQLKDA