New model in OGS2.0 | DPOGS213796  |
---|---|
Genomic Position | scaffold493:+ 16518-25279 |
See gene structure | |
CDS Length | 5823 |
Paired RNAseq reads   | 1234 |
Single RNAseq reads   | 3091 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006780 (0.0) |
Best Drosophila hit   | CG13531 (3e-20) |
Best Human hit | spatacsin isoform 2 (9e-15) |
Best NR hit (blastp)   | PREDICTED: hypothetical protein [Nasonia vitripennis] (5e-92) |
Best NR hit (blastx)   | PREDICTED: hypothetical protein [Nasonia vitripennis] (2e-98) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0016021 integral to membrane GO:0005829 cytosol GO:0005634 nucleus GO:0016020 membrane GO:0008219 cell death |
InterPro families   | ND |
Orthology group | MCL14059 |
Nucleotide sequence:
ATGGAAGGTTTAAGTCAAAATGAGAAGATTATTTGGAATTGTTGGCAAGAAAAATCACAC
AAAGATGTGGTTCGTGAAGCTGCTGCCAAAGGTACACATATTAATTTGTGTCTGAAATAT
CTCATGAAAAAAAATTCTTGGACAGAGACTGAGGCAAGGCATTGGTTCTTAAATGAGGTA
AAAACATGGACTGATCAATTATTAAGGAGAAAACAAATTTTTAAAGTTTTACACATACTT
AATAAATGTGACATAAATCCTGAGGAGCATTTAATGGAACTTGCAAGGTCATCCGCCCAG
ATCGACTACAGGGACTTCATAGTAGAGCATTTGCAAAAACTTATAAAAGATTTCAAAAAG
GATAACATTGAAAAGTGGGAAAATTTTAAAAGACATTGGAACTTGCTCCAATATCTTGAA
AAATCATTTGAGGTTGACGGTACTTTCAAACAAAATAAAGTTTTCGGTACCGGATCTGAA
AGAGTATTTGTTAATGAGAGTGAAATAAAAGCTCTGACTATAGAAAAGATCGAAGAATAC
CCATCAGAATGGAAGTGCAATATCGCAACTGCATTGTTTTTTGACACATTTGAGTTCTCA
CTTCTGGATTTTTCATCTCCTCTTCAGATGTGGAATTATTTGGTGAAGCATAACAAATCA
ATGATTCTCGTCCGTTGGATAAATGTTCAGATGTCCGAGGTTGTTCGAGATATGAATGCG
AGATATAATTTTTTCAATAACGATAATTTCGTTCAGAAGCTGCTGACTGTGGATACGAAG
GGTTTTACACACGAGGTCCTCGACACTCTTGATGAGATTTTTCGCAAATGGCCCATTCTG
CCGGAAATGATCGATAAAATTGATACGTCTGACTGTTTTGAATATACAAAGATGTGTATT
TACGACACCTTGGCCTCGTACGGAATAATAGTTCAGAAGGAGAAAACGGATTTGTATGAA
ATAATTGGTAGGTTAACGAGAACGCAGAATTTGAAACTCATTGACGACATATTCTCTGAA
TCATGCGCTACGATGAGCAATCAGGACTTTTATCTGCAGCTGGCCAAATATTACGTGAAA
CATAAATTGTATAAGGTTTTAACAATTTGCATAGAGGGTCATATATTGGACACGGATTTG
TCGCAGATTGAACAGGAGGCCAGAGATTGTATCGAGCTGTGGTTGTTGTTTAAAAGTATT
GAACAAACATCAGACAGGCAGAGTCACGTGGTGCCTGTGTATAAAACTTGCCAGCAGATT
GCTAAGGACGATATCGATAATTATATTTCGTCTAATCCCCATCTGGTCCTCGGCATGATA
TTACTCGAAGACAACGCCAGCTTGTTCGATATATTCTCCAAAAGCGATTTTCTTGAGTTC
AAAGATTTCAAACTACCAAATATGGGCTACAAACAGAAGTTGCCACACCTGTACAGAGTA
TATGAAAGATCTACTAGTAGTGATTATATGTATGAATGTAAGGATGTCAATGTTTATCAG
TTGCTTTCTGGCTATCGAGGTTTGGACGTGTCTAAGATATTCGAATTCCAAATAATTAAT
AGAAACACAAACGTTCAAATGCCGGATAAAACTGACCGCAGAAGCTTAGGCAGTTTGCTG
TCCGACGAATTAGATGTACACGGTTTGAAAAATTTAACCCAAAGAACTATTGATATGCCA
GACTTCGCGAATGACAAACTAATGAAGAGATATGGTTATGATGCTAAACTGAACCACATA
TATTATTTGAAACAATACCGTCCTTGCAACGCAAGCCAGGCGTTTGTTTCACATCAGTAC
CAAACATATAATCGACTCCAAGAGAAAGGTATAAAAAGCGCATGCTGTGAAGCCCACGCC
TTGGCTCTTCAGAACTGGTTCGACCCCGCTATGACTGCTTGTGCTATATCATTCGTAGCC
ATGATCGGATGTAACCCCACTAGATGTAGAGTTCACGTCTCAGCCACTAAAATGATTAAA
AATCATCTCATCTATCGAAAGGGTTTGCCTGAAAATGAAGTTAACAAAATCGTTAACGAA
TATATGGTGAAACTTATTCAGAGCAACGACGACACAGCGAGGACCATATTGAAGTACTTA
GAGGAAGTGACGTCTTGCAGACTAAAAGAAATAAGAGAAATCAATGGCGAAATAGATATG
TCTGTGGTTTTATATGAATCTCAAACGATGATAAAATTTGCAATGCTACACAATTTACCA
TTACCGGAGGAACAGTTGAAACAGTTTGTCAATGATAATTCTTGGTTTAATTTCTTGGTA
TTTGGAGACGTTTTCAGATACCCTCTATCACAAATGTTAAAACTGTCACAGGAATTCAGT
AGGAGGTCTTATGCCGAACACTTAAAACATATAATACTTAATAAATCTACTGAAGACGAG
AAAGAACAAAAGCCTAGTTCAAGTAACGGGCAAAGAAAATTAACGAGACTGAATTCTGGA
GACATTTGTCCCAAGGAAAATTTAGCGGACCAAGCTGTGTATCTAAGTCGTGAGCTTTGG
GAGGTTTCTGCATCATGTCATGGCCCGGAAGATCCTCCGGCAGCTTTGTTAAAATCTGCT
CAACAGTATAGAGAACCATTGTTAGTATTACTAGCTAGCTGCTACGAGCCAAATGCCGTT
GATGTTCTGTGGGGTCATTGGATTTTGGCGTCGATAGAACCCACTACGAAAAGTCGGGAG
GACCTGCAAGCGGAAATTTCCCAAAACAATCCGGCGCAGCTATTGATGAAAATCGCAGAA
GTCTGTATTATGGAAGGCTACGTCAACACTTTGCACGAATCCTTTCTTATATTTATGCCG
GAAAGTCCACTCGCTCTTCTCACGGCATTCCTTCACCGTTGCGTTAAGCAATTGATTTTT
GATTCGGAAACTAACAAGTATGTCACGAGTTTCCTTAATCATTGTCATCGCAGATACAGC
GTCGACGCCAGCGGCTTTCCATTCGAATTGTCGAAGGAGTCGCTTCAAAGAACAGCAGTT
GCACTGGTCGTACTAACACTTATACACAATTTCGACTCAGCCTTCCATCAAAGGGAGTTC
TTGAAGTGCTTATCTGATTCCCGCTTTGGAGTCGATTTTATAGTTCCTTGCCCAGATTTT
ACAACATTGTATGAAATCTTCAAAACCTCTATGGAGACATCGTCAATCATGACGCTGTCA
AAAATGTTGCAAGAAGATTCTCATGTTTACATCAACGAATGCGTGGAAATGTATACGCGC
GAGAAAAACTATGAGGTGGCCTTAAAAATTGCAAAATTAGCTGGTTTGCCGGTCGATTAT
ATTTTAATAGCCGAATGGAGTATTAAACGCGATAAGATCACTACGTCAGACGATGAGAAC
GTGGTAGTATACGAGGCGGACGTTACAAAATTCATAGCCACCTGCAGTGATGTATTTAAA
AATGCCGGTGTCACTTTCAATGGAGCGGTCAGTTTTCTATCTGGAATACCTAAACAAATC
TCCGACGATGGTCTACAGTTCTACGCGTATAGAATTATTTTGAGTTGGTTTGAAGAAAAT
CACGTGTACGGAGAAAATAGAGAAGAAATCGAACATCAAATGTGGGAAGCGTATTTTAGA
TGTGACAGGTCGCCGTATTTGAAAGATTCTCAGAGCACATTGAAGTTTGTGTTGAATAAT
ACAAGAGAAACAATATCTTCACCGAATATAAATCTAAATTTAGAAGACAAACCGTTCTCG
TCCACTCTGCATGAGATCGAAGTTGAATCTGATGTTATAAATGTAGAGAATATTGAACTC
ATAGAACATAAAGATGTGATAGAGAACTGGCAGAAAGCAGTTAACGGTTTGTTAGAGGAG
AAACTGCTCGTGGAAGCGTTTCGTTTATCATCGTTATTCAGAATTCCTGATGAGTACCGG
TTCAAAATACCAGCTTGTCCTGTAAATATTGTAAGGACATGTTTAAGATTGGCCGAAGGC
ACATGCTCGCCTTACGAACTTCCCCAAGAATTGAGACTCATTATATCTTCGCCCACACTC
CAGAACAAGCTAAATGTTTCAGAAGCTTCGGAGACAAGTTTCGAGGAATTGGTTGTTGTA
CCGGATCGCCAGGACGGTGAAGTGCCACACTTGGCAGTGAGAGAAGAAGTGGACCGTTTG
TCTACTTTGGAAGCGCTGGCTGTTAGGAGTGGTTTAACTGTGGCTAAACAGATCACAAAT
TACTTCCGAATCGCCCTACAAATCGGTTGGGATTATTTGTCTGTCTTGAAATATCAAAGT
CGTCCATTGGATTTCATCAACTTAGTAAGCGGCAGGGCCAGAATGTCGCTGGCGAATCTC
GTCTTCAGAACTTTTAATGTACCATCTAAACAGATTGCAGAATATTTATGCAAAGAAATG
GTAGCAGCAATAATATCCCCGCATTTAGTGAAGACATCGACGTTCAGACAGAAGGAGCAT
TTCCAATACACGCTATGGGGATACGTTCTGGATTCCGATATTGAGATGTTTTTAAACATG
CGGCCAGGCGCCTGTAGTCAGATCGGCAGACTGATACTCGACCATCTCATGGCCTTCCAG
AAGATATATAAAGCTACGACCATATCCAAGATAACGGAGAATGTTCTAGACGACGGCTGT
CTCGACGTGGAAACCCTCATAGACGAAGAGTACCAGAACGTTGATGGTGACGAGGTCGAA
TCGATTTTGACAGAAGAAGGGACGATCGTTTCTACTGAAACTGAATCCGTCTACTCGGTG
TCCACGGTGTACACTACTGGGAATAAGATGTCCAGAGACTCGAGGAGGAATCTCTTCGAT
GTGATATCGAAGACGAATATTCACATACCTTATGAAATTAAATCTAACATTCGGAAAATT
ACTAAAGGAGCGAAACTTTCCACTAAACAGGTGAACACGATCTCCATCGAGCTGCTGGTG
TTGTCTCACGAGTGTTTCTCATGTGCGTGTGATACAGAGGGCGTGGCAGTCTGCCTTCGA
TCCGCTCAAGCCCTCAGCGCTCGTCTCTTGGCGTCTCGATCTTGGAGGCTGATGGTCCGC
TTACTCACGGGCCTGGCGCGGTACACGGAATGCGCGTATATACTTCAGGCTTTGCGCGAC
AATCATCAATTTGAATTTCTTCTCGGACAATTCGACTATATGTTGGGCCAGCAGCAGGAT
AAAATAGTTGAATTCAAGCATGGCCTGCTCGATTTCCTAAAGACCCATTGCCCCGGGGAT
ACGGACACTTACATCATGGTGGCGCTTCACTTCAATATGTACGCTGAGGCAGCTAATGTG
AAGAAGAAACAAGCGTTACATCTAATAGACGACTTGGAGAGAACGGCGGAAGCCTCGAAA
CCCTCAAAGAAGACCAACGAACCGGTTTGGTTGATGATACACGATAATGTCCCGACGAGA
ACTCTCCTAGAAACAGCTCTAAATCACTGCACCGACGCTTGTGAGTTATACCTTCAAGGC
GGATGCACTGGATTTGCGGGATCGATGGCAGCGCTCGCCCAACAGATAGCATTACAAATC
TCATTACTGAACGCGTCTCCAACAAGACTTATCTTAAACAGAACTACCGAGCAAACATAT
TTGCTTGTGAGTGATTATTTGAGTTTCATGGAGGGTCTGGTGTTATTGTCGGGTGCTGGT
GGCGGTGTTTGGCGCGAGCTGGCCTACCGCCGAGCTCTCAATAACGACCAGGCTTACCTT
CGAGATATGGCTGTTTACAGACCTGACGTAGCCTGTGACATCATTAACAGATATAAGTCC
GAGACGAACAAGACTCAAGTGTCCCAATCAGCTATGGCGGAACTCCGTACGCTGATGAGG
TGA
Protein sequence:
MEGLSQNEKIIWNCWQEKSHKDVVREAAAKGTHINLCLKYLMKKNSWTETEARHWFLNEV
KTWTDQLLRRKQIFKVLHILNKCDINPEEHLMELARSSAQIDYRDFIVEHLQKLIKDFKK
DNIEKWENFKRHWNLLQYLEKSFEVDGTFKQNKVFGTGSERVFVNESEIKALTIEKIEEY
PSEWKCNIATALFFDTFEFSLLDFSSPLQMWNYLVKHNKSMILVRWINVQMSEVVRDMNA
RYNFFNNDNFVQKLLTVDTKGFTHEVLDTLDEIFRKWPILPEMIDKIDTSDCFEYTKMCI
YDTLASYGIIVQKEKTDLYEIIGRLTRTQNLKLIDDIFSESCATMSNQDFYLQLAKYYVK
HKLYKVLTICIEGHILDTDLSQIEQEARDCIELWLLFKSIEQTSDRQSHVVPVYKTCQQI
AKDDIDNYISSNPHLVLGMILLEDNASLFDIFSKSDFLEFKDFKLPNMGYKQKLPHLYRV
YERSTSSDYMYECKDVNVYQLLSGYRGLDVSKIFEFQIINRNTNVQMPDKTDRRSLGSLL
SDELDVHGLKNLTQRTIDMPDFANDKLMKRYGYDAKLNHIYYLKQYRPCNASQAFVSHQY
QTYNRLQEKGIKSACCEAHALALQNWFDPAMTACAISFVAMIGCNPTRCRVHVSATKMIK
NHLIYRKGLPENEVNKIVNEYMVKLIQSNDDTARTILKYLEEVTSCRLKEIREINGEIDM
SVVLYESQTMIKFAMLHNLPLPEEQLKQFVNDNSWFNFLVFGDVFRYPLSQMLKLSQEFS
RRSYAEHLKHIILNKSTEDEKEQKPSSSNGQRKLTRLNSGDICPKENLADQAVYLSRELW
EVSASCHGPEDPPAALLKSAQQYREPLLVLLASCYEPNAVDVLWGHWILASIEPTTKSRE
DLQAEISQNNPAQLLMKIAEVCIMEGYVNTLHESFLIFMPESPLALLTAFLHRCVKQLIF
DSETNKYVTSFLNHCHRRYSVDASGFPFELSKESLQRTAVALVVLTLIHNFDSAFHQREF
LKCLSDSRFGVDFIVPCPDFTTLYEIFKTSMETSSIMTLSKMLQEDSHVYINECVEMYTR
EKNYEVALKIAKLAGLPVDYILIAEWSIKRDKITTSDDENVVVYEADVTKFIATCSDVFK
NAGVTFNGAVSFLSGIPKQISDDGLQFYAYRIILSWFEENHVYGENREEIEHQMWEAYFR
CDRSPYLKDSQSTLKFVLNNTRETISSPNINLNLEDKPFSSTLHEIEVESDVINVENIEL
IEHKDVIENWQKAVNGLLEEKLLVEAFRLSSLFRIPDEYRFKIPACPVNIVRTCLRLAEG
TCSPYELPQELRLIISSPTLQNKLNVSEASETSFEELVVVPDRQDGEVPHLAVREEVDRL
STLEALAVRSGLTVAKQITNYFRIALQIGWDYLSVLKYQSRPLDFINLVSGRARMSLANL
VFRTFNVPSKQIAEYLCKEMVAAIISPHLVKTSTFRQKEHFQYTLWGYVLDSDIEMFLNM
RPGACSQIGRLILDHLMAFQKIYKATTISKITENVLDDGCLDVETLIDEEYQNVDGDEVE
SILTEEGTIVSTETESVYSVSTVYTTGNKMSRDSRRNLFDVISKTNIHIPYEIKSNIRKI
TKGAKLSTKQVNTISIELLVLSHECFSCACDTEGVAVCLRSAQALSARLLASRSWRLMVR
LLTGLARYTECAYILQALRDNHQFEFLLGQFDYMLGQQQDKIVEFKHGLLDFLKTHCPGD
TDTYIMVALHFNMYAEAANVKKKQALHLIDDLERTAEASKPSKKTNEPVWLMIHDNVPTR
TLLETALNHCTDACELYLQGGCTGFAGSMAALAQQIALQISLLNASPTRLILNRTTEQTY
LLVSDYLSFMEGLVLLSGAGGGVWRELAYRRALNNDQAYLRDMAVYRPDVACDIINRYKS
ETNKTQVSQSAMAELRTLMR