| Genomic Position | scaffold7640:- 4447-8365 |
|---|---|
| See gene structure | |
| CDS Length | 2175 |
| Paired RNAseq reads | 7 |
| Single RNAseq reads | 40 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | Gag protein [Bombyx mori] (1e-67) |
| Best NR hit (blastx) | Gag protein [Bombyx mori] (6e-44) |
| GeneOntology terms | ND |
| InterPro families | IPR013084 Zinc finger, CCHC retroviral-type IPR001878 Zinc finger, CCHC-type |
| Orthology group | MCL10285 |
Nucleotide sequence:
ATGTTTTCGTGCGGAATACGTATCGCGCACTACGTCCATTTTGTCGTCGAGAGACAGAGA
CGCCGTACGGTGCATACAGAAGATGTTATTGCTACTGTAGAGTGTAGCATTGAGGAAGAC
CCGAATCAGTCCATTCATCGGCGAGCACAGGAATTGGATCTATGCCCATTCACTTTTTTG
TGGAAGGATCTTGGTTGTGTAAGATGGGAGATAGAGAGTATGATGGGGGGGGGGGGGGGC
CCGGGGGGTGGGAATGAGTTTGGTGCGGACGACTCAATGTCGTCGCGCCCAGAGTCGGTG
TTGGGAGCCAAGCGCCTCTTTTCGGAGGTGTCAGGCTCCGACACCGAGACTGGGGGTGAT
GTCATCAGAGGGAAGGTTCCGGCGGGAAGGCGAGGCCGCGGTCATACGCTGGCTAAGGCC
AGGAGATTCCTGCGGGAGCGTGAAGAGGAGGAGTCAGAGGCTGCCTTTAACTCCTGCCTC
GAGAAAAGCCTCGGGAGGGAGAAGAACGGGGCAAGGACGAAGAAGAAGGAGCTCCCTGTG
GAGCTGGAAAGCATGGGGGCGGAAGGGATAATGATCGAGGCCGAAAAGAACCTCGATGTT
ATCAAGGAGCTAGTCGGGAAGAGTTCGAACCTGAAAGGGGGATACTCTTCCCGGATCATG
AGGGCCTCGGCGTTCCTACGCGAAGCACTGGATGTGCTGGTGACGCGAACGGAGGCTGAG
GAGACCCGCCGTCTCAGAGCCGACATTGGTCGGCTCCAGAGAGAAAACGCGGGTCTCAAG
GAGGAGGTGCGCGCTCACCGGGAACAATTCCAGGAGATGTGTAAGGAGAGGGCTTCGATG
GTAAGAGCGGCGGCGGATAGTCCCATAAACCGGGACCAATCTCAAGTGCTGGAGGCCAAC
ATCGCCAGGTTGGTTGGCAACCTGGTGGATGGGCGGTTGGCCGCACTGGAGTCCCGGCTC
AAGCGGGAAGAAGTAGCCCGCCCTCCCCTGGCGGGTGACAATTCGGTCGAAGCCATTGCG
GCCAGGAGGGCGATTCGACAGGCGGCCCTGCAGAGGGGGTCCAAGTCATCGGCCCCTTTG
GCGGCGCCACCGGCGCCGGTGGTATCCTCCGACGAGGATTTCCCTTCCCTCCCTGCGCCT
TCCAAAGGGAAAGGCAAGAGGTCAAAGGGAGGGAAGGAGGTGGTATGGACTGCATTCGGT
CCATCCACATCGGCTGGGGGGACAGATCGGGGTAAAGTGGGGAACGGAGCCAAAGCGGCG
GGGTGGACGGAGGTGGTTCGCCGCAAGGCCCCGAAGAAGAAGGAGGTGGTGCCGGTGCCG
AACACGCCGGCGCCGCAAACAAAGAAGAAGGTGGGCCCTAAAGAGGGCCCCAAGAAAGTG
GCGCTCCCACGCTCCCAGGCCGTAATGCTTAAGTTACGGCCTGAGGCAGCGGCCAAGGGA
GCGACCTACTTGTCGGTCCTCCTAAGGGCCGAGAGGGAGGTTAACACGAAGGAGCTGGGC
ATCGGGCCCCTGAAAATCCGTGCATCGGCAACAGGGGCCCGCATCATCGAGGTGCCCGGC
TCAGCCAGCGCGGACAAAGCCGACGCTTTGGCCGCGAAGCTGAAGTCCGTGCTGGCGGAG
GAGGCGGAGGTGTCGAGGCCCGTGAAATTCACGGACGTAAGAGTAACGGGCCTCAACGAC
GCGACGACCGCGGACCGGCTGATAGCCGCGGTCGCGCAGGAGGGGGGCTGCACCGAGGCC
CAGGTCAGGGTTCGTAGCGTGCGACCTGGGCCTCGCGGCACAGGCTCTGCCCTGGTGGAG
GTGCCGGCTGCAGCGGCGAAAAAGTTGCTGCAGCTGGGCAGCCTGTCAGTCGGGTGGAGC
CAAGTGCGGCTCTCGCATATGGAGGCACGACCCAAGCACTGTTTTAAGTGCTTGGGAACG
GGGCACGTCGCGGCCGCGTGCCCTAGTCCAAAAGACCGCAGCGGTTTGTGCTACCGCTGC
GGCAAGGAGGGCCACAAGTCCGCCCAGTGCTCCGCGTCACCGCGCTGCGCTGTGTGCGCT
GACGCGAGCAAGCCGGCGGACCATGTGATGGGGGGTCATTCGTGCCGCCCCCCATCCACC
CGTGGGAAACTCCCGGCCCAGCCACAAAGGGCGGGGGTTTCGAGGCGGGCGTCGGGAGCT
GAGATGTCCGAATAA
Protein sequence:
MFSCGIRIAHYVHFVVERQRRRTVHTEDVIATVECSIEEDPNQSIHRRAQELDLCPFTFL
WKDLGCVRWEIESMMGGGGGPGGGNEFGADDSMSSRPESVLGAKRLFSEVSGSDTETGGD
VIRGKVPAGRRGRGHTLAKARRFLREREEEESEAAFNSCLEKSLGREKNGARTKKKELPV
ELESMGAEGIMIEAEKNLDVIKELVGKSSNLKGGYSSRIMRASAFLREALDVLVTRTEAE
ETRRLRADIGRLQRENAGLKEEVRAHREQFQEMCKERASMVRAAADSPINRDQSQVLEAN
IARLVGNLVDGRLAALESRLKREEVARPPLAGDNSVEAIAARRAIRQAALQRGSKSSAPL
AAPPAPVVSSDEDFPSLPAPSKGKGKRSKGGKEVVWTAFGPSTSAGGTDRGKVGNGAKAA
GWTEVVRRKAPKKKEVVPVPNTPAPQTKKKVGPKEGPKKVALPRSQAVMLKLRPEAAAKG
ATYLSVLLRAEREVNTKELGIGPLKIRASATGARIIEVPGSASADKADALAAKLKSVLAE
EAEVSRPVKFTDVRVTGLNDATTADRLIAAVAQEGGCTEAQVRVRSVRPGPRGTGSALVE
VPAAAAKKLLQLGSLSVGWSQVRLSHMEARPKHCFKCLGTGHVAAACPSPKDRSGLCYRC
GKEGHKSAQCSASPRCAVCADASKPADHVMGGHSCRPPSTRGKLPAQPQRAGVSRRASGA
EMSE