| New model in OGS2.0 | DPOGS205918 |
|---|---|
| Genomic Position | scaffold453:+ 67240-73554 |
| See gene structure | |
| CDS Length | 2205 |
| Paired RNAseq reads | 251 |
| Single RNAseq reads | 601 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007081 (5e-06) |
| Best Drosophila hit | topoisomerase 3alpha (0.0) |
| Best Human hit | DNA topoisomerase 3-alpha (0.0) |
| Best NR hit (blastp) | prokaryotic DNA topoisomerase [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | prokaryotic DNA topoisomerase [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0006265 DNA topological change GO:0008270 zinc ion binding GO:0016605 PML body GO:0003917 DNA topoisomerase type I activity GO:0005515 protein binding GO:0005694 chromosome GO:0006268 DNA unwinding involved in replication |
| InterPro families | IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IPR023406 DNA topoisomerase, type IA, active site IPR013497 DNA topoisomerase, type IA, central IPR006171 Toprim domain IPR010666 Zinc finger, GRF-type IPR000380 DNA topoisomerase, type IA IPR023405 DNA topoisomerase, type IA, core domain IPR003601 DNA topoisomerase, type IA, domain 2 IPR003602 DNA topoisomerase, type IA, DNA-binding |
| Orthology group | MCL13613 |
Nucleotide sequence:
ATGAAATACTTAAATGTTGCTGAGAAAAATGATGCTGCTAAGAACATTGCAGGATTTTTA
TCAAATTTTAAACATAGAAGGCGAGAAGGTCTTTCTAAATTTAATAAAATTTATGAATTT
GATGCTGAAGTGATGGGTCAAAGGAGCAAAATGGTTATGACTTCAGTTTCAGGGCATCTT
TTAAATTATGAATTTGTAAATAAAAACGAAAGTAAAAAATGGGACGCATACGATCCCAAA
AAACTATTCTATGAACCAGTCAGAAAATGCTGTCCGGATAACTATAAAAATATTAAGGAA
ACTCTACAAAGGGAGATTAAAGGATGTGATGGTCTTATAATATGGACAGATTGTGACAGA
GAAGGTGAAAATATAGGTTTTGAAATTATAGAAGTCTGCAAAAACATTCAAAGAAATATA
AATATATACCGAGCAAAATTCTCAGAGATTACTGCACAATCTGTAAGAAGAGCTCTCAGT
AACTTAGGAGTTCCCGATGAACACACAAGCAAAGCTGTAGATATCAGACAGGAATTAGAC
TTAAGGATAGGTGCAGTTTTTACAAGATTTCAAACAGTCAAAATACAATCGTCATTTCAA
AACAACGTTTCTAACAAAATAGTTAGTTTTGGTTCATGTCAGTTCCCAACACTGGGATTT
GTTGTCGAAAGATGGAGGGCCATTGAAAATTTTATACCGGAAAAATTTTGGAAGTTACAA
GTCAATCACACTCTCGGTAATGAGAGTACAGATTTTTTATGGGACAGGGTTAAGATATTT
GATAAAGATATATGTAATATATTCTATAATATGTGCTTAGAAAATAAAACGGCCACCGTT
GTTAATGTCGAGACAAAACCAAAGACCAAATGGAGGCCCCTACCTTTAGATACAGTAGAA
TTAGAAAAGCAAGCGTCGAGGCTATTGAAAATTAACGCGAAAACAACAATGAAGATAGCG
GAGAAGTTGTATACGGCTGGTATCATAAGTTACCCGCGCACAGAGACCAACCAGTTCTCC
AATGACATCAACTTAGTGAAGCTGATTGAACTTCATAAGGATGATCCTAGTTGGGGGACA
TTTGCGCAGAATGTTCTCTCTCAGGGACCCAACCCTAGGAGAGGAAACAAAAGCGACCAA
GCCCACCCTCCCATACATCCCACAAAATATGTGACCAATCTGGTCAACATGGAGCGTCGT
GTGTACGAGTTCATAGTAAGGACGTTCCTCGCCTGTTGTTCCAAGGACGCGGTCGGGAAG
GAGACCACGGTCAGGCTGACGGTAGCGGACGAAGGCTTCCACGCGTCCGGCCTCATAGTC
ACGGAGAGGAACTACCTGGACGTGTACCCCTACGATAAATGGACCTCTAAACACATACAC
GACTATCAGGTTGGCGACACTTTCACAGCGACCAAAGTGGAAATGATAGAAAGTGAGACC
TCCCCGCCCGAACTGCTGACAGAAGCTAATTTAATCACTCTCATGGAAAAACATGGAATA
GGCACGGACGCGACGCACGCGGACCACATAGAGACTATAAAGATTCGAAACTACGTGGTC
ATAGAAGGAAACAAATTCAAACCGACCGAGCTAGGCAGAGGACTGGTCGAGGGATACGAC
ATGTTAAGTCTGCCGATGTCCAAACCGCATCTGAGAGCCAACTTCGAGGCAGATCTCAAA
CTTATATGCGATAGGAAAAAATCCGCTGACGCGGTCTTACGTGACCAGATAGAAGAATAC
AAAAAGCTCTACGACAAAATGCTGTTGGAACAGAACAAGCTGATTGGTTTATGGAAACGA
AGGTTGCAGAACTACACGTGGAGTGAACCACGGCCAGGTGCTGGTTCCGAGAGCAGTTCA
AACGCTGCGCCGCGGAATACTCCGAGTACATCGAGCGCGTCTCGTACGGGTAGCGGGCAC
TCGGTGTTGTGTCACTGCAACAGACCCGCCGCGACACTAACATGCCAGAAGTCAAACGAA
AACAGAGGAAGGAAGTTTTACAAGTGCCAGGAATGTAACTTTTTCAAGTGGGTAGAAAAT
TCTTTGCCTTCAAATGCACAGAACCCTTACGAAACTCCACCGAGTTCTGGGGGAACTAAC
GGCGCCGATACCAACCGACCGACCACGAGTCGTCAACCTCGTCTTTGTTCCGTGTGTCGT
CGTCCAGGACACAACATAACCAACTGTCCAGCGAGAGGGGTCTGA
Protein sequence:
MKYLNVAEKNDAAKNIAGFLSNFKHRRREGLSKFNKIYEFDAEVMGQRSKMVMTSVSGHL
LNYEFVNKNESKKWDAYDPKKLFYEPVRKCCPDNYKNIKETLQREIKGCDGLIIWTDCDR
EGENIGFEIIEVCKNIQRNINIYRAKFSEITAQSVRRALSNLGVPDEHTSKAVDIRQELD
LRIGAVFTRFQTVKIQSSFQNNVSNKIVSFGSCQFPTLGFVVERWRAIENFIPEKFWKLQ
VNHTLGNESTDFLWDRVKIFDKDICNIFYNMCLENKTATVVNVETKPKTKWRPLPLDTVE
LEKQASRLLKINAKTTMKIAEKLYTAGIISYPRTETNQFSNDINLVKLIELHKDDPSWGT
FAQNVLSQGPNPRRGNKSDQAHPPIHPTKYVTNLVNMERRVYEFIVRTFLACCSKDAVGK
ETTVRLTVADEGFHASGLIVTERNYLDVYPYDKWTSKHIHDYQVGDTFTATKVEMIESET
SPPELLTEANLITLMEKHGIGTDATHADHIETIKIRNYVVIEGNKFKPTELGRGLVEGYD
MLSLPMSKPHLRANFEADLKLICDRKKSADAVLRDQIEEYKKLYDKMLLEQNKLIGLWKR
RLQNYTWSEPRPGAGSESSSNAAPRNTPSTSSASRTGSGHSVLCHCNRPAATLTCQKSNE
NRGRKFYKCQECNFFKWVENSLPSNAQNPYETPPSSGGTNGADTNRPTTSRQPRLCSVCR
RPGHNITNCPARGV