| New model in OGS2.0 | DPOGS211974 |
|---|---|
| Genomic Position | scaffold71:- 52061-53521 |
| See gene structure | |
| CDS Length | 942 |
| Paired RNAseq reads | 279 |
| Single RNAseq reads | 727 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000920 (3e-98) |
| Best Drosophila hit | sarcoglycan delta, isoform C (8e-43) |
| Best Human hit | delta-sarcoglycan isoform 3 (3e-30) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (2e-56) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007505 [Tribolium castaneum] (9e-54) |
| GeneOntology terms | GO:0008307 structural constituent of muscle GO:0016012 sarcoglycan complex GO:0007016 cytoskeletal anchoring at plasma membrane GO:0007498 mesoderm development GO:0016021 integral to membrane GO:0045214 sarcomere organization GO:0060047 heart contraction GO:0043034 costamere |
| InterPro families | IPR006875 Sarcoglycan complex subunit protein |
| Orthology group | MCL39481 |
Nucleotide sequence:
ATGAAGGTTGAGGATGCCAACAGTGAAGGTATCCGGGGTTGGGGCTGTACACCCCCCGGG
GAGCCCCCGCCGGCTACAGTGACCACCTCCGCCACCGTTACCACTACACCGCCCGCCTGT
CTACCGCCGTTCGTCACACGAGGATGGAGACGAAACGCGCTCTATGGAATCATAGTGTTC
CTCATCATACTCGTATTTCTTAATATCGCCTTGACATTGTGGATTATAAGTACCTTGAAA
CTGAGCGCGAGAGGTATAGGACCGATCACTATCATCAAGGAGGGGATCCGGTTGGATGGA
CAGGCTTGGGTCCTTGACAATCTGATCGCGTCCACGCTGTCTTCACAAACGGGTCAACCG
CTCACCCTGCACTCATACCGCAATTTCACTATCATAGTGTCCGATGAAAACCACAAGGAA
GCAGCAAAACTATTCCTGAAACGAGACAGCCTGGAATGCAGTGGTCGTTCGTTCCACGTG
CAAGACGCTCGCGGCGAGGAGGTGTTCCACGCGTCTCGAGAGGAGGTGCGCGTCTTCTCG
GAGACTCTGTCAGTGAGTGGAGCGGGCGGGCTGGCAGTGAGGGGAGCTCTGCAGACGCCG
GTAGTACGAGCTCCGCCGGCTGCAGACTTACAGTTGGAATCATTGACGAGGCGACTCGAC
CTGCGAGCCCCGCAGTCCATCCACCTGGAGAGTAGAGCGGGGAGTATCGACATAACATCA
CACAGCGACATTCAATTAGACTCAGTCGTCGGAGCTATTAAGATCGACGCTCCTAACATC
ATAATAAGCAATTTAAAAGAAGCCAAAATCGCAGACAATCCCGCTAAGAATATGAGAAAA
AAGGTGTACCAGCTGTGCGCCTGCGGCTCGGGGAAGCTGTTCCTGGCACCCTCGGACGGG
AGGTGTAGTGTGGAGGAAGAAGACCAAGAACTCTGTAGATGA
Protein sequence:
MKVEDANSEGIRGWGCTPPGEPPPATVTTSATVTTTPPACLPPFVTRGWRRNALYGIIVF
LIILVFLNIALTLWIISTLKLSARGIGPITIIKEGIRLDGQAWVLDNLIASTLSSQTGQP
LTLHSYRNFTIIVSDENHKEAAKLFLKRDSLECSGRSFHVQDARGEEVFHASREEVRVFS
ETLSVSGAGGLAVRGALQTPVVRAPPAADLQLESLTRRLDLRAPQSIHLESRAGSIDITS
HSDIQLDSVVGAIKIDAPNIIISNLKEAKIADNPAKNMRKKVYQLCACGSGKLFLAPSDG
RCSVEEEDQELCR