New model in OGS2.0 | DPOGS211975  |
---|---|
Genomic Position | scaffold71:- 35106-36359 |
See gene structure | |
CDS Length | 1254 |
Paired RNAseq reads   | 932 |
Single RNAseq reads   | 3093 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001223 (0.0) |
Best Drosophila hit   | dead box protein 80, isoform B (6e-161) |
Best Human hit | ATP-dependent RNA helicase DDX19A (8e-155) |
Best NR hit (blastp)   | DEAD box ATP-dependent RNA helicase [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | DEAD box ATP-dependent RNA helicase [Aedes aegypti] (0.0) |
GeneOntology terms    | GO:0004004 ATP-dependent RNA helicase activity GO:0008026 ATP-dependent helicase activity GO:0003676 nucleic acid binding GO:0005524 ATP binding |
InterPro families    | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR014014 RNA helicase, DEAD-box type, Q motif IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
Orthology group | MCL10691 |
Nucleotide sequence:
ATGAAAATAATCAGACAAGGTCTAGTAGAATCCAAATTAGATATTGAAATCCAACGAAAG
GATCCCAATTCCCCTTTGTATTCAGTCAAAACTTTCGAAGCCTTACATTTAAAACCAAAT
TTACTGAAAGGTGTTTATGATATGGGATTCAATGCACCATCCAAAATCCAGGAAACTGCT
TTGCCCACACTCTTAGCTGACCCACCCCAAAATATGATTGCACAATCTCAGTCGGGAACA
GGAAAGACAGCTGCATTCGTGTTGGCAATGCTGAGCAGAGTTGATCCAACTAAAAATTAT
CCTCAAGTGTTGTGTCTCAGCCCCACTTATGAATTAGCGATTCAAACCGGAGAAGTGGCC
GCCAGAATGGCTAAATTTTGTCCAGAAATTAAAATGAAATATGCAATTAGGGGTGAAGAA
CTGCCAAAAGGAACGAAGATCAATAGCCACATTCTCATAGGAACTCCAGGCAAAATGTTA
GATTGGGGAGTTAAATTTGGAATGTTTGACTTAAATAAAATCAAAGTATTTGTTCTGGAC
GAGGCGGATGTGATGATCGACCGGCAAGGCCATCAAGACCAGTGTATTCGTATACACAAA
TGTCTGCCTCAAACCTGTCAGATGATGTTTTTCTCTGCCACCTATGACAGTGCTGTCATG
GGATTTGCTGAAGCCATCGTGCCCAATCCTATCATAATAAGATTGTTGAGAGAAGAAGAA
TCATTAGATAATATTAAACAATATTATGTTAAGTGCAAAAATGCAGAGGACAAATACAGA
GCTATTTGTAATATCTATGGAGTGATCACTGTCGGACAAGCAATTATATTCTGTCACACG
AGAAAAACGGCCAGCTGGTTGTCTGAAAAGATGTCTAGAGATGGCCATTCTGTAGCTGTG
CTCTCTGGAGAGTTAACGGTGGATCAGAGGATAGCAGTTCTCGACCGTTTCAGAGGAGGT
GTGGAAAAAGTGTTGATAACTACCAATGTCCTCTCTCGAGGAATAGACGTGGAGCAAGTG
ACTTTAGTAGTCAACTTTGATATGCCAATGGATATAAACAAGAAGGCTGACTGTGAAACT
TACTTGCACAGAATCGGTCGCACTGGAAGATTCGGTAAAGCCGGTATAGCTATTAATTTG
GTTGACTCACCGCAGGCAATGGAAATATGCCTCGACATTGAAGCCCATTTTGGGAAAAAG
ATTAATTTGTTAGACATTGAGGATGCCGAGGAAATCGAAAAAATTGGTGCATAA
Protein sequence:
MKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYDMGFNAPSKIQETA
LPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPTKNYPQVLCLSPTYELAIQTGEVA
ARMAKFCPEIKMKYAIRGEELPKGTKINSHILIGTPGKMLDWGVKFGMFDLNKIKVFVLD
EADVMIDRQGHQDQCIRIHKCLPQTCQMMFFSATYDSAVMGFAEAIVPNPIIIRLLREEE
SLDNIKQYYVKCKNAEDKYRAICNIYGVITVGQAIIFCHTRKTASWLSEKMSRDGHSVAV
LSGELTVDQRIAVLDRFRGGVEKVLITTNVLSRGIDVEQVTLVVNFDMPMDINKKADCET
YLHRIGRTGRFGKAGIAINLVDSPQAMEICLDIEAHFGKKINLLDIEDAEEIEKIGA