| New model in OGS2.0 | DPOGS211846 |
|---|---|
| Genomic Position | scaffold71:+ 26842-27381 |
| See gene structure | |
| CDS Length | 540 |
| Paired RNAseq reads | 148 |
| Single RNAseq reads | 946 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000925 (4e-96) |
| Best Drosophila hit | CG14216 (2e-65) |
| Best Human hit | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (4e-59) |
| Best NR hit (blastp) | Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori] (2e-97) |
| Best NR hit (blastx) | Ssu72 domain protein [Bombyx mori] (3e-96) |
| GeneOntology terms | GO:0005634 nucleus GO:0006397 mRNA processing GO:0004721 phosphoprotein phosphatase activity |
| InterPro families | IPR006811 RNA polymerase II subunit A |
| Orthology group | MCL15453 |
Nucleotide sequence:
ATGAATAGGAGTATGGAAGCACATGCTTTCTTAGCCAAAAAAGGTTTCAAAGTGAAATCT
TACGGGACCGGAGAGAAAGTGAAGTTGCCCGGTGCATCCGCAGACCGACCTAATTGTTAT
GAATTCGGTGTTCCCTACGACGATATATACAATGATCTGTTAGAAAAAGACAAGGCTTAT
TATACCCAGAATGGTCTGTTACACATGTTAGATAGGAATCGAAGAATAAAACCTTGCCCA
GAGAAGTTCCAAGTGTCAACAGAGCGTTTCGATGTCATAATAACATGTGAAGAAAGAGTT
TACGATCAAGTCATAGAATGGTTCGGATCCAAGAGGTCTGTTTACAACCAACCCGTACAC
GTTGTGAATGTGGACATTCAAGACAATCACGAGGAAGCCACTATAGGAGCTTTCCTGATA
AGCGACATGGTCACTAAGATGGCTCAGAGTGACGACTTAGACAATGACATTGACGAGTTA
CTTCATGAATTTGAATCCAAGTGCCACCGACCCATTCTGAACTGTATCATGTTTTATTAA
Protein sequence:
MNRSMEAHAFLAKKGFKVKSYGTGEKVKLPGASADRPNCYEFGVPYDDIYNDLLEKDKAY
YTQNGLLHMLDRNRRIKPCPEKFQVSTERFDVIITCEERVYDQVIEWFGSKRSVYNQPVH
VVNVDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY