| New model in OGS2.0 | DPOGS211854 |
|---|---|
| Genomic Position | scaffold71:+ 138684-148484 |
| See gene structure | |
| CDS Length | 2322 |
| Paired RNAseq reads | 68 |
| Single RNAseq reads | 187 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001228 (4e-165) |
| Best Drosophila hit | CG42265, isoform B (1e-50) |
| Best Human hit | otopetrin-1 (2e-06) |
| Best NR hit (blastp) | PREDICTED: similar to otopetrin [Tribolium castaneum] (4e-119) |
| Best NR hit (blastx) | PREDICTED: similar to otopetrin [Tribolium castaneum] (2e-116) |
| GeneOntology terms | GO:0016021 integral to membrane |
| InterPro families | IPR004878 Otopetrin |
| Orthology group | MCL20400 |
Nucleotide sequence:
ATGGCGGAAACAGTTCAGCTAGGAAAAGAGCTGGTGGTGGAAATCGAGAACAGGAAAAAC
CTAGGAGACAAGAAGTTTCATTCGGAGACCTCATTGCAAAATTTATCTGGTGAAGCTGAT
AGGCCTGCATTCATAACTACGAAAGATCCTGGGATAATGAACGAGACCGTCGCAAGTCCA
TCTCTGGAGGAGATCCCTGAGCGTCGTCGGACCATGTCTCAGCCGATGCCGGGCGCCGGG
GCCCTCCTCACCGCCGCCACCAACAGACGCCGGCGGCCGCCGCGCTCCGTCATGTACGCC
TCGGACATTCAGACCAATGATTCCTCGGAGCGACTGCCGAAAATGTTCATGCCAAACAGA
GAAGATTACTACTTCAGTCCGTCGCCTTCGAACGGGAGCCCTACAAACTTTTTTTTCCCT
CATAACAATTACAAAAACGGAGACATCAAATCTCTCAGTAGTTACCGTCTGAACTCTCAA
GTAGGAAGTGGGACTCCTCGCAAGCGCTCGGTGACGACCATGGACGCTCAGTCCATCCGT
TCAGTAGAGACTCAAGCACCGCCCCCCACCAGCCCCGAGGATAACGCGCGCCTCTCAACT
AAATATCTCTGTCTTATATTAAGTTGTATGTACGCTGTTCTGTTGGTGACGGTCGGCCTT
ATTATCTACGTGACGGAACCCTTTGTCGCTATCAATGCGTCTCCCATATACTCGATGGTT
TTACTCGTGATCGGTTTTTTGTATCAAATCTATTTATTAATAGACATAACGAAATACAAA
ACGAACGTGTTAAAAAACCAAAAGATTAAATGGATGCACAACGAGAAACTGCAGGAGTTC
TTCAGGAAACAGGAGGAGGAGGCCAGACCTGGTAGTATATCAGAGCGACCTTTGGACAGT
GTTAGGGCGAAGGCTATACCACCAGCTGTACTGATCCCAGTCAACCACAGCTACTGCTTC
AGTACCGGAAGGCACTCCGGTAGCTTTTACCTTAAGATGGGTGCTGCAGCGTTCGCCGTG
GGCCACTTAATCCACTCGGTGTTACTCATAACAACACAGATCAGTTACCTCTTCGACGAT
AACATATCCAATGAGACATGTATTGACGTAATGCAAGTCATACTGGACTTCTGTCAGCCG
ATCTACTGCTTCCTTCAATTGTTCTTCATATTTAAGTATTCGAACGTGCTCATTATAAAA
GGTCAGAACTTGGCTTACTTCGGCTTTATGCATATGATCGGAAGCAGTCTCTGCTTTTGG
ATTTCGACCATTGTGCGTGAAATTTTATTGGCGTTAACTATATATGCAAATCTCAAATAC
GGAAACAAAACGGAATACGGTCCTGACACAGTGAGCGAATACCACCACGTCACACCACAC
ATAGACATCAGCGACCTCTACAGGCCGGAGTGTCAAGGCTCGGCGACCATCAGTCGGATC
ATAGACAACTTTTCTCCATATCTATATCCGTTTGGAGTTGAATTCAATATTCTCATTGTC
GCTGTATACTACATCATCTGGAGCCAGATTGGAAAATGTCCCAACGAAGATTCAGACAAC
GACTCCAGCATCGATGACAATACAACGATCTGCAAAATCCCAACGGCTGATGAGGAAAAT
GACTTCACCAGTAACATGGTGATCTACGCGGACTGTCACGCTTCCAACAAGGGCATGTTC
CTCGGTCTCATACTAACAGTCGTCATGACCGGAATGCTTATCCTCGGATTTATCTTTAGC
ACCATTGACAACAAATTCTTAGAAAAAGGCTATCTCTTGAGCTCCTGCACGAAACTGGCA
CTCCATTCGGTGCTGCTGGTGGCTACTGTGGTAGCCTTCATTCAGACGAGAAAACTCGAC
ATTAACGAACATCCGATCTCTCTGTTGGACGACATCCTTCTATTCATCTGTCTGCCGGCT
TTCTTTATGGAGACAGTGTTCTCGATGGTGGCTACTGTGAGCATCGTGAATATCATCAGA
TCAATAGACGTCATGGTCATGATGATTCAAGTTGTAATCCAGACTGCGCTGTTGGTGGAC
GGCCTTCGACGCTGCAGCAACAGTCGGAAGTTGCGCCGCAGTAAGCCAGCTCGTGAGATG
CTGATGTTCCTCGTCATAGCCAACGTCGCCGTGTGGCTCTTCAACACTTTCTCTTACAAA
TCGCCTGAGAGTTTAGACGAGAGATACGAGTTCTATGGCAAAGTGCTGTGGAGCATCCTG
GGCCACATCAGTCTCCCTCTCATCATGTTCTATCGATTCCACTCCAGTGTGTGCTTCGCC
GACATTTGGGATGCCGCTTACAAACCCGGTTCCGAACACTGA
Protein sequence:
MAETVQLGKELVVEIENRKNLGDKKFHSETSLQNLSGEADRPAFITTKDPGIMNETVASP
SLEEIPERRRTMSQPMPGAGALLTAATNRRRRPPRSVMYASDIQTNDSSERLPKMFMPNR
EDYYFSPSPSNGSPTNFFFPHNNYKNGDIKSLSSYRLNSQVGSGTPRKRSVTTMDAQSIR
SVETQAPPPTSPEDNARLSTKYLCLILSCMYAVLLVTVGLIIYVTEPFVAINASPIYSMV
LLVIGFLYQIYLLIDITKYKTNVLKNQKIKWMHNEKLQEFFRKQEEEARPGSISERPLDS
VRAKAIPPAVLIPVNHSYCFSTGRHSGSFYLKMGAAAFAVGHLIHSVLLITTQISYLFDD
NISNETCIDVMQVILDFCQPIYCFLQLFFIFKYSNVLIIKGQNLAYFGFMHMIGSSLCFW
ISTIVREILLALTIYANLKYGNKTEYGPDTVSEYHHVTPHIDISDLYRPECQGSATISRI
IDNFSPYLYPFGVEFNILIVAVYYIIWSQIGKCPNEDSDNDSSIDDNTTICKIPTADEEN
DFTSNMVIYADCHASNKGMFLGLILTVVMTGMLILGFIFSTIDNKFLEKGYLLSSCTKLA
LHSVLLVATVVAFIQTRKLDINEHPISLLDDILLFICLPAFFMETVFSMVATVSIVNIIR
SIDVMVMMIQVVIQTALLVDGLRRCSNSRKLRRSKPAREMLMFLVIANVAVWLFNTFSYK
SPESLDERYEFYGKVLWSILGHISLPLIMFYRFHSSVCFADIWDAAYKPGSEH