New model in OGS2.0 | DPOGS205984  |
---|---|
Genomic Position | scaffold176:- 94168-96534 |
See gene structure | |
CDS Length | 456 |
Paired RNAseq reads   | 23435 |
Single RNAseq reads   | 64595 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009411 (7e-76) |
Best Drosophila hit   | ribosomal protein S16 (2e-68) |
Best Human hit | 40S ribosomal protein S16 (6e-64) |
Best NR hit (blastp)   | RecName: Full=40S ribosomal protein S16 (7e-79) |
Best NR hit (blastx)   | RecName: Full=40S ribosomal protein S16 (8e-78) |
GeneOntology terms    | GO:0006412 translation GO:0022627 cytosolic small ribosomal subunit GO:0003735 structural constituent of ribosome GO:0005811 lipid particle GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization |
InterPro families    | IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR020574 Ribosomal protein S9, conserved site IPR000754 Ribosomal protein S9 IPR020568 Ribosomal protein S5 domain 2-type fold |
Orthology group | MCL12465 |
Nucleotide sequence:
ATGGCTGCCGCGCAAGAGGCGAGACGTGAACCTATTCAGGCCGTCCAAGTATTCGGACGC
AAGAAAACAGCCACCGCCGTAGCGTACTGTAAACGCGGTCGTGGAGTCCTTCGAGTCAAC
GGTCGTCCCCTCGACTTAGTGGAGCCCCGTCTGCTCCAATACAAACTTCAAGAACCAATC
CTGTTACTGGGAAAGGAAAAGTTCTCTGGCGTAGACATCAGAGTAACTGTGAAGGGTGGT
GGTCATGTCGCTCAAGTTTATGCCATCAGACAAGCCATCTCCAAAGCACTAATAGCTTTC
TACCAGAAATTTGTCGACGAGGCGTCAAAGAAGGAAATCAAAGATATCCTAGTTCAGTAC
GACAGGAGTTTGCTGGTCGCTGACCCGAGGCGCTGCGAGCCGAAGAAATTCGGTGGACCG
GGAGCTCGGGCCAGATACCAGAAATCATACCGTTAA
Protein sequence:
MAAAQEARREPIQAVQVFGRKKTATAVAYCKRGRGVLRVNGRPLDLVEPRLLQYKLQEPI
LLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKFVDEASKKEIKDILVQY
DRSLLVADPRRCEPKKFGGPGARARYQKSYR