| New model in OGS2.0 | DPOGS202447 |
|---|---|
| Genomic Position | scaffold742:+ 20874-34269 |
| See gene structure | |
| CDS Length | 3540 |
| Paired RNAseq reads | 20207 |
| Single RNAseq reads | 52366 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009970 (2e-93) |
| Best Drosophila hit | Z band alternatively spliced PDZ-motif protein 52, isoform F (1e-101) |
| Best Human hit | PDZ and LIM domain protein 3 isoform b (1e-33) |
| Best NR hit (blastp) | PREDICTED: similar to CG30084-PC, isoform C [Apis mellifera] (1e-122) |
| Best NR hit (blastx) | PREDICTED: similar to CG30084-PC, isoform C [Apis mellifera] (1e-116) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005515 protein binding GO:0030018 Z disc GO:0005927 muscle tendon junction |
| InterPro families | IPR001478 PDZ/DHR/GLGF IPR001781 Zinc finger, LIM-type IPR006643 ZASP |
| Orthology group | MCL12212 |
Nucleotide sequence:
ATGGCACAGTTGATAACTGTGCGACTGAACAAGTCCGATCAGCAGCCTCTTGGCTTCAGG
CTGCAGGGCGGCAAGGATTTCGGCACTCCGCTGGTTGTACAGAAGGTGAACGGTGGGAGT
GCGGCTGAGCGGGCGGGTTTGCAGGCTGGGGATGCGCTCATTCGAGTCAACAATACTGAC
GTGTACTCCCTGAGACATCAAGAGGCACAGGACGCTATACGCGCTGCTGGCGGGAATCTG
GAACTGACTGTGCAAAGAGGTGGTGGTACGTGGCGTCCTACCGTCACTCCTACTGGAAGC
CTCCCTCGCCCGGGATCTCGTCCACTGGGTGCCGCCCCCGCTCCAGTCACCAGCACCTCT
CTGAAGGCGACCCCTCAACCTTCGAGGGCCTTCGGTTCTGGTCACAACAACGTCGCCAAG
CCGTTTGGATATATGAATGGCAACGATTCAGTGAAGAGCATTGTCAACAAACAGTACAAC
ACACCTGTTAGTATGTACAGCGACAAAACTATCGCTGAGACACTCTCCGCCCAGACCGAG
GTTCTTGCGGGCGGTGTTTTGGGAGTGAACTTCAAGAAGAACGAAAAAACTTACGACGCT
GAAAAAAGTGCTGTATTCAAGGTGTTGCAAGAGGCTGAAAACGATCCTGAGCCAGTATCT
GAGGCGAGCCCGGGGGCGACGACCCCTGTGAGTGGTCTCCGTCACGTGTCCGCGCCCGTG
GCCCGCGACACGCCCGTCAACACCGGGGGCCTGCCCACGGGACAGAACATCTGTGAGGAC
TGCGAGCGACTTATCACGGGTGTGTTCGTACGTATCAAGGACAAGAATTTGCACGTGGAG
TGCTTTAAGTGCGCCACGTGCGGTTCCTCGCTGAAGAACCAGGGTTACTACAACCTGAAC
GGGAAGCTGTACTGCGACATCCACGCCAAGCTGGTTGCGAGACAGAACCCGCCCGCACCG
AACTTGGAACCCGTCACTGTAGCTCCCGGTGGCCGCGTGCCGACGAACGCTTACTCGACT
CCGCTGCCACCGCTGTCCACCAACAACTACACCAACGGATCATCATCGATGTTTAGCCCA
TCTAGTAATCTGTCTGGTCCGAAGCCGTTCGGTTCGTCCCTGGGCACGTATTCTCCGTCG
TCGTTGTCTCCTCGCTCGGCGCCGCTCTCTCCCCGGACACCAAACTCTGCACCTGCACCT
GCACCTGCACCGGCCCCTGCACCACAACACGCGTTCGCACCAACCAAAAACGTCAAAAGC
ATTGTGTGGCCCCCTCCTAATCCCTCAGAAGATGAACCCGAAAGTGAACTTAATGTAAAT
TGTAATCAAACCTCATTACACAGTGATTTCACTTCTTTGTCTGAAGAAACAATAACACAA
AATACCAACAATAGAAAAATAACTGCTAATGAAATAAAGACTACGGATTCATCTATAACT
CCGTTGTTGCAAACAATGGAGTTTTCTTCAAACGCCTTATTTGATACGACGCAGATGGCG
TCGTCTACCATAAAATCACAAACCGCTGTTCAGAAGCAACGATCTGAGATTAAACAAGAA
TTTTCAAGTTGCACCGTTCAATCGTACTCACAGCAAGCTTCTGATTGCAAACAATTTTCT
GTCTATCAAAATGTTGTGGCACCAGAAGAAATGAATAAGAGAAATAACACCATGGAAAAA
TCACGACTTGAACATAGTTCAAATGTCGTGCAATCTAAATTTAAGACGGGAGAGAGTGTG
TCTCAAAACTTTCCTCCTCTCAATGCAAATACTTCAAACACAAAAATGCAGCCATGTTGG
AATAAAGTAAGCGATAATAAAATACAAACTAAAGAAAATCCAATGTCATCAAAAGTGACA
CAATCAGGTGTTAAGGCACCCGAATCTAAGAAGTCTATAAGTGGAAAACCCCTGGCTGGT
ACAGCAAAAACCAATACTTTGCAAAGAGGATCCCTGTTAGAAGCCCTTACTATAGCTCCA
GATCGACCATACAGTCCATTATCGTTTCATATACCAACAGTGCATTACAATAAGTTTCAA
TCCGGAGAATACCAGCCTTTGTCATCTGAAGCTGTGCCATCACTATCGTTTTCGGAATGT
AGTCAATCTAATCAATCAAATCAAACTTCAGAACAAAGTGCAATACAAAATTCTGGAATT
TTGCAATCAACAGCAGCAACTTCAGCATTCAAACCGGTGTGCAAACAAACGTTTCCACCT
CCAAAACCACAAGAATTATCGTCACAACCTTTTTCTAATTTAAGTAACCAAAGCAGTGGT
TATAAAGATTTCTCTCAATCAAAACAGGAAACAGTACAGGAGTTTAAACTGTCACAAAAT
AAAATGCAACAACATGAATCCTCTATTTCTACAACTGCTTTACCCAGATCAGAGGGTATT
CCACAATATCAACAAGTTCTAGTACCAGAAGTATATAACCCAGAGCAGCAAAAGTCTTTC
ACGCCATGCAACCCAACAAATAAAGTCGCTAAAACGGACAGACCGATGACTTTCCAACCA
GTTGTAGATGAAACATCGCTTAGAATATCACCTGCTCGGAGCCGTCCAACAACACCAGGT
ATGATCAATAAGCCGGCTCCCATAATACCTCATTATCAAATGAATTTAGTTTCTATTGAG
CATCAAGCTCCAGAAAGCCGTTTATACAAACCTGGTAGTGCTGAAGTCAGTCGTTCTTCA
ACTCCCATAGCACGATGTCATTCTCCGGCACCTGGGCCTCCAGCTAATCCTCTAAAGGCA
CAAGCTCCCAGAATAAAACAAACATCTCAATCTACCTTTGAACAAGCACAATCTTGCAAT
AAGCAATTGTCAAACATCCGAAAAGAACACGAGATGTCAGGACCAGAGTTACAATCTCAG
ATGTCATCGTTTAGTCCTTCAGATTTAAAAACTTATAACCCGAATCAACCCACGGTTATA
AAAGACGAAAGACAAGCAAATGTAGAATATCGCACGGAAAATTATAGTCAAGGTGATCTG
AATATAAAAGAAGACTCTATGTTAAATCAGAACTACGGCGAAAAACAAACAGAATTTCAA
AATATAAGTGAATATGGCGACACTACCGTTCAGACTACAAAAAAAACCTTCGAAGAATAC
GAAAGCTCACAATCCGCTAAGGTTATAGAAATTCACAAGGGCGATTCACAAACTTACTGT
TTAAATCAGCCGATTGATTCTAATACGCAACCATATAATTCTAACTCCAAGCAGGTGTTC
CCCCCTCCTCTTTCAACCATGACTCCAACCCAACAAAACTTACTTCGTACTAATGACAGT
GTTGTCAATGCTAGTAAACGATCAGAAATGTATCAACCAACTCCTTTTATATCTGGTGCT
AACCAAGGTCCAGTGTGTGATCCTACCCCATCAACAGGTTCCAGTGTAGGAGCTGCGGCT
CGTGGTAAAGCTTTTGGCGTTTCATCAGCTCCAAAACGTGGCAGGGGTATCTTAAACAAA
GCCGCTCTACCCGGCTCTCGTGTACCTCTTTGTGGGTCCTGCAATGGCAACATTAGGTGA
Protein sequence:
MAQLITVRLNKSDQQPLGFRLQGGKDFGTPLVVQKVNGGSAAERAGLQAGDALIRVNNTD
VYSLRHQEAQDAIRAAGGNLELTVQRGGGTWRPTVTPTGSLPRPGSRPLGAAPAPVTSTS
LKATPQPSRAFGSGHNNVAKPFGYMNGNDSVKSIVNKQYNTPVSMYSDKTIAETLSAQTE
VLAGGVLGVNFKKNEKTYDAEKSAVFKVLQEAENDPEPVSEASPGATTPVSGLRHVSAPV
ARDTPVNTGGLPTGQNICEDCERLITGVFVRIKDKNLHVECFKCATCGSSLKNQGYYNLN
GKLYCDIHAKLVARQNPPAPNLEPVTVAPGGRVPTNAYSTPLPPLSTNNYTNGSSSMFSP
SSNLSGPKPFGSSLGTYSPSSLSPRSAPLSPRTPNSAPAPAPAPAPAPQHAFAPTKNVKS
IVWPPPNPSEDEPESELNVNCNQTSLHSDFTSLSEETITQNTNNRKITANEIKTTDSSIT
PLLQTMEFSSNALFDTTQMASSTIKSQTAVQKQRSEIKQEFSSCTVQSYSQQASDCKQFS
VYQNVVAPEEMNKRNNTMEKSRLEHSSNVVQSKFKTGESVSQNFPPLNANTSNTKMQPCW
NKVSDNKIQTKENPMSSKVTQSGVKAPESKKSISGKPLAGTAKTNTLQRGSLLEALTIAP
DRPYSPLSFHIPTVHYNKFQSGEYQPLSSEAVPSLSFSECSQSNQSNQTSEQSAIQNSGI
LQSTAATSAFKPVCKQTFPPPKPQELSSQPFSNLSNQSSGYKDFSQSKQETVQEFKLSQN
KMQQHESSISTTALPRSEGIPQYQQVLVPEVYNPEQQKSFTPCNPTNKVAKTDRPMTFQP
VVDETSLRISPARSRPTTPGMINKPAPIIPHYQMNLVSIEHQAPESRLYKPGSAEVSRSS
TPIARCHSPAPGPPANPLKAQAPRIKQTSQSTFEQAQSCNKQLSNIRKEHEMSGPELQSQ
MSSFSPSDLKTYNPNQPTVIKDERQANVEYRTENYSQGDLNIKEDSMLNQNYGEKQTEFQ
NISEYGDTTVQTTKKTFEEYESSQSAKVIEIHKGDSQTYCLNQPIDSNTQPYNSNSKQVF
PPPLSTMTPTQQNLLRTNDSVVNASKRSEMYQPTPFISGANQGPVCDPTPSTGSSVGAAA
RGKAFGVSSAPKRGRGILNKAALPGSRVPLCGSCNGNIR