| New model in OGS2.0 | DPOGS202447 |
|---|---|
| Genomic Position | scaffold742:+ 35308-38189 |
| See gene structure | |
| CDS Length | 1632 |
| Paired RNAseq reads | 4033 |
| Single RNAseq reads | 20105 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009970 (2e-08) |
| Best Drosophila hit | Z band alternatively spliced PDZ-motif protein 52, isoform I (3e-87) |
| Best Human hit | LIM domain-binding protein 3 isoform 5 (6e-48) |
| Best NR hit (blastp) | PREDICTED: similar to CG30084 CG30084-PF [Tribolium castaneum] (1e-92) |
| Best NR hit (blastx) | PREDICTED: similar to CG30084-PC, isoform C [Apis mellifera] (4e-91) |
| GeneOntology terms | GO:0001952 regulation of cell-matrix adhesion GO:0015629 actin cytoskeleton GO:0051371 muscle alpha-actinin binding |
| InterPro families | IPR001781 Zinc finger, LIM-type |
| Orthology group | ND |
Nucleotide sequence:
ATGGCCCTCAACGGCTATGAAATTGGAATTCAGAGAAAAATAAAACCAGCCGACCATATA
CAGTCCATGGCTGACAAAATTCAAGATACGGTGGTTACAAAACATCCTCTCAACACCGAC
ACCATACCTTCTGCTGATACTAGTCGTGATAATACTTTGAAACGATCAGTAAACAAGAAG
TTTGAAAATAATTTGAAATCCATTGATTATACGCCTCTGAAACCAACCAATGGAAGCTAC
TTACCAAACAGTAACGGGACAAATAACACGTTCAACAATACACATACACCCATCCCTCCA
CCTCTTCCAACAACTCCGGTGCCAACATTTCAAGTGCACAGCACGCCTATCACAAATATA
TTGAATAGCATTGTACCACAGAATTCAGAGTACAATAACGCTATTAAGAACAATATCTAT
GACGAATCCACGTTTAATGAGAAAACTCAAAATGGTGGTTATTCAAGCAATGACGATTCA
ATTAAAAGCAAATCAGAAAATATTTTTGACAGCATCTCCAAAAAGAAAACGGCTTTCGAA
AAAGTTACGGATGATTCGAATTCTTCAAATCATCATGATTTTAAAAATGAGTCTAAATCT
GAAACAAATTATTCCAATACATTGAGCAAAAGAAGATTATTCGAGAGAAGCGACGCTTTC
AATGAATCCTTGACAAAAAATACGCAGAGGAGTACGGAAAACAGTAAAATGTCACATCAT
GACAAAGAGATTCTAAATAAAAACAGTTACTCCAAAAATAATTTTACCCAAGAGTCCAAG
ATAACAAAGGAACAAGACGAGAACGACAAAAAACTACCGAATGATCTAATTGATGATTCT
TTGTATAATTTTAAACCAGTGCTTAACGGAGGCGCTTCGTGTAGTAGCAGTAACAGTGGT
TACAGTGGAAACAGTAGCGGGAGTCGGAGCAATGGGATCAGTAACAAACAGGAAAAGGAT
TCAGACGGTTACTGCGAAGAAGTTGTTGTAAAACGCAGACAGAAAAATAATAGAAACGAC
AACGGCCGTAGAGATTCCCGAATCGTCGCGAGACCATTGAGTACCATGACCTCAGAGGAT
GTGACCGACGGGCAATACATTTGTCATGTATGTGACAAGGCCATTACCAGGGGTCCGTTT
ATTACCGCGTTGGGTCGTATTTGGTGTCCTGAGCACTTCGTTTGTGTTAGCGCATCCTGC
CGACGTCAGTTGCAAGACATTGGCTTCGTGGAAGAAAATGGCCAACTATACTGCGAGTTC
TGCTTCGAGCAATACATCGCCCCTCCTTGCGACAAGTGTCATAACAAGATAAAACAGGAC
TGCCTGACCGCTATCGGCAAACGCTTCCATCCAGAATGCTTCAACTGTGTATACTGCGGC
AAACTGTTCGGGAACAGTCCGTTCTTTGTAGAAGACGGTCTGCCATATTGTGAAGCAGAT
TGGAACGAGCTGTTTACGACCAAATGTTTCGCTTGCGGTTTCCCCGTGGAGGCCGGCGAC
AGGTGGGTGGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTGTGC
AAGAAGAACTTGCAAGGGCAGAGCTTCTTCGCCAAGGGAGGTCGACCTTTCTGCAAGTCT
CACGCCCGCTAG
Protein sequence:
MALNGYEIGIQRKIKPADHIQSMADKIQDTVVTKHPLNTDTIPSADTSRDNTLKRSVNKK
FENNLKSIDYTPLKPTNGSYLPNSNGTNNTFNNTHTPIPPPLPTTPVPTFQVHSTPITNI
LNSIVPQNSEYNNAIKNNIYDESTFNEKTQNGGYSSNDDSIKSKSENIFDSISKKKTAFE
KVTDDSNSSNHHDFKNESKSETNYSNTLSKRRLFERSDAFNESLTKNTQRSTENSKMSHH
DKEILNKNSYSKNNFTQESKITKEQDENDKKLPNDLIDDSLYNFKPVLNGGASCSSSNSG
YSGNSSGSRSNGISNKQEKDSDGYCEEVVVKRRQKNNRNDNGRRDSRIVARPLSTMTSED
VTDGQYICHVCDKAITRGPFITALGRIWCPEHFVCVSASCRRQLQDIGFVEENGQLYCEF
CFEQYIAPPCDKCHNKIKQDCLTAIGKRFHPECFNCVYCGKLFGNSPFFVEDGLPYCEAD
WNELFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTVCKKNLQGQSFFAKGGRPFCKS
HAR