| New model in OGS2.0 | DPOGS209559 |
|---|---|
| Genomic Position | scaffold612:- 18673-28345 |
| See gene structure | |
| CDS Length | 2052 |
| Paired RNAseq reads | 2175 |
| Single RNAseq reads | 6081 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012449 (0.0) |
| Best Drosophila hit | groucho, isoform E (0.0) |
| Best Human hit | transducin-like enhancer protein 4 (2e-151) |
| Best NR hit (blastp) | GJ23911 [Drosophila virilis] (0.0) |
| Best NR hit (blastx) | GA21035 [Drosophila pseudoobscura pseudoobscura] (0.0) |
| GeneOntology terms | GO:0007399 nervous system development GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0005515 protein binding GO:0003714 transcription corepressor activity GO:0005634 nucleus GO:0016481 negative regulation of transcription GO:0007541 sex determination, primary response to X:A ratio GO:0003677 DNA binding GO:0030178 negative regulation of Wnt receptor signaling pathway GO:0007015 actin filament organization GO:0048813 dendrite morphogenesis GO:0043234 protein complex GO:0045879 negative regulation of smoothened signaling pathway |
| InterPro families | IPR009146 Groucho/transducin-like enhancer IPR005617 Groucho/TLE, N-terminal Q-rich domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site |
| Orthology group | MCL10171 |
Nucleotide sequence:
ATGTATCCGACGCCGACGCGGCACCCCGCTGCTGCTGTGAGGGGGCCGCAGCCCGCGACT
GGACCTATTAAGTTTACGATAGCAGATACTTTAGAACGTATTAAGGAAGAGTTTAACTTT
TTACAAGCACAATATCACTCATTGAAACTAGAATGTGAAAAATTAGCCAGTGAGAAGACT
GAAATGCAGAGACATTATGTGATGTATTATGAAATGTCATATGGTCTTAATGTGGAGATG
CATAAACAGACAGAGATAGCGAAACGGTTGAGCGCAATAATCGGCCAAGTGCTGCCGTTC
TTAGCTCAGGAGCATCAACAACAAGTCGCGGCTGCCGTGGAACGAGCTAAGCAGGTCACT
ATGTCTGAACTTAATGCTATTATCGGGCAACAGCAACAACAAGGTCTCCAGCAACTCCTT
CAACAGATCCACGCGTCAGGGCTGCCACACGGTGTTGGAGGGGCGCTGCTGGGTGCTGGT
GTTCTGTTCCCTGGAGCCCCTGCGCCACCACACTTGCCGCCACCCGCGCATAAGGTTGAG
CTTCCTCCGCCCGCTGACATTAAGCCGCCGGTGTTAGCGAGCGGCCCACCCGCGCCGCAA
CGAGACGACGATCGGATACCCACGAGAAATATGAACACACAGCAGAGGCGTTCGTTGTCA
CCGCACGAGCGCGAACAGAAGTACAGGCCCAGGTCGCCGGAGCCAGAGACGTCAGACGTG
AAGAGGAGGAAGGAGGAGAAGGTGGGGCATGACAGTGATGCCGAGAAGAGCGACCAGGAC
CTGGTTGTGGACGTGGCTAACGAGGAGGAACGCGGCTCCCCGAGCGCGAGAACGGAGGGC
GGGGAGCGGGCGGAGAATGGCCCGAGACCTCCCTCAAGGTCCGGCTCGTCCTCCAGCAGA
TCCACGCCTAAGAGCTCCAAAGACGAGAAACCAGGAACTCCGGGGGGCAAAGCCCGAGCC
CCTACTCCGACGGGCCGGTACGCGTTCCCACCTTACGCCTATCGACCGCCGCTGCCTTAT
GAAGGACCGCTAGCAAGGACTAACGGCCTGCCTCCCGCTAAACCTGCGTATTCGTACCAC
ACGTGCGGCGGCCCGCTTCAGCCGGTGCCGTTCCCGGCAGACGCGCTAGTGGGGCCCGGC
ATCCCTCGCGGCGCTCGACAGGTGGCGGCTCTGCCGCACGGCGAGGTCGTCTGCGCTGTC
GCTCTGTCGCTCAGCGGCGGCTCGCGGCACGCCTACACCGGTGGCAAAGGCTGCGTCAAA
CTATGGGACATTACTAACCCCGGACCTAACATGGAACCATTGTCACAGCTCGACTGCCTG
CAAAGGGATAACTACATACGGTCAGTCAAACTGTTACCGGACGGTCGTACACTGTTAGTA
GGGGGCGAGGCGTCTAACCTCTCTATCTGGGATCTATCTTCACCCACGCCGAGGATCCGC
GCCGAGCTCACGTCGTCCGCGCCCGCCTGCTATGCACTCGCCATAAGTCCCGATTCTAAG
GTATGCTTCAGTTGTTGTTCAGATGGCAATATAGCAGTATGGGATCTCCACAATCAAACA
CTAGTTAGACAATTCCAAGGTCATACAGACGGAGCGTCTTGTATAGACATCAGTCCGGAC
GGTTCTCGCCTGTGGACGGGCGGCCTCGATAACACAGTGCGGTCGTGGGATCTCAGAGAA
GGCCGTCAGTTACACCAACACGACTTCTCTAGTCAGATATTCTCATTAGGATACTGTCCT
ACGGGTTCCTGGCTGGCTGTGGGTATGGAGAATAGTCACGTTGAAGTCTTACACGCGGGG
AAACCGGACCGCTATCAACTTGTTCTACATGAGTCCTGCGTGCTGTCACTGAGGTTCGCA
GCCAGCGGCAAATGGTTCGTCTCCACTGGGAAGGATAACTTATTGAACGCGTGGCGGACA
CCTTACGGAGCTAGTATATTCCAGTCAAAGGAATCATCTTCGGTGCTGAGTTGTGATATA
TCTTCGGATGATAAGTTCATAGCAACGGGTTCCGGCGACAAAAAGGCTACAGTGTATGAG
GTGGTGTATTGA
Protein sequence:
MYPTPTRHPAAAVRGPQPATGPIKFTIADTLERIKEEFNFLQAQYHSLKLECEKLASEKT
EMQRHYVMYYEMSYGLNVEMHKQTEIAKRLSAIIGQVLPFLAQEHQQQVAAAVERAKQVT
MSELNAIIGQQQQQGLQQLLQQIHASGLPHGVGGALLGAGVLFPGAPAPPHLPPPAHKVE
LPPPADIKPPVLASGPPAPQRDDDRIPTRNMNTQQRRSLSPHEREQKYRPRSPEPETSDV
KRRKEEKVGHDSDAEKSDQDLVVDVANEEERGSPSARTEGGERAENGPRPPSRSGSSSSR
STPKSSKDEKPGTPGGKARAPTPTGRYAFPPYAYRPPLPYEGPLARTNGLPPAKPAYSYH
TCGGPLQPVPFPADALVGPGIPRGARQVAALPHGEVVCAVALSLSGGSRHAYTGGKGCVK
LWDITNPGPNMEPLSQLDCLQRDNYIRSVKLLPDGRTLLVGGEASNLSIWDLSSPTPRIR
AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISPD
GSRLWTGGLDNTVRSWDLREGRQLHQHDFSSQIFSLGYCPTGSWLAVGMENSHVEVLHAG
KPDRYQLVLHESCVLSLRFAASGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI
SSDDKFIATGSGDKKATVYEVVY