| New model in OGS2.0 | DPOGS201143 |
|---|---|
| Genomic Position | scaffold684:- 215-8794 |
| See gene structure | |
| CDS Length | 2280 |
| Paired RNAseq reads | 327 |
| Single RNAseq reads | 819 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003947 (0.0) |
| Best Drosophila hit | CG10064 (3e-126) |
| Best Human hit | WD repeat-containing protein 16 isoform b (1e-134) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL009035 [Aedes aegypti] (6e-178) |
| Best NR hit (blastx) | WD-repeat protein, putative [Pediculus humanus corporis] (5e-168) |
| GeneOntology terms | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site |
| Orthology group | MCL13807 |
Nucleotide sequence:
ATGGACGTGAAAAACTTAGAACCTTGTAGTATAATAGGTTTTGATGGCTCAGCAATAAAA
GGTTTAAATGTTCATCCGGATGGCGATCACATCGTCTATCCAATTGGCAACAAGGTGTGC
ATTCAGGAATGGAAGAGTAAGAAGATGTATTTCCTCAGTGGACACACTAACAGTGTTTCG
ACTTTGGCCATTTCACCCAAAGGCACATACGTAGGGTCAGGACAAATAAACCACATCGGC
TTCAAAGCCTCGACGAAATTGTGGGATTTTAAAAAGAAAGTTTTGATTGGGACTCATGAG
CTCCATAAAGTGCGTGTTGAGGCTCTTTCGTTTTCGTCTGATGAGCGTTACATGATATCC
CTGGGCGGGAGGGATGACGGCTGTATCGTCCTATGGGACTGTGTGGCGGGCGCCGCCACC
GGCACCGCGGCCGCCGCCAAGCTTACCACCGGAGACGCCATGACACTAGTGCCGCTCAGT
TTGAGAGTCAATTCATTTGTTACGGGAGGAGATTCGAATCTCCGTGTCTGGAACATTCGG
GCCGGCAGCAAGAACTTGGACGTGGTGGACGTGTCCCTGGGCAAGCTGAGGCGATGCGTG
CGATGCATCACCGTCAGCAACGACGACACTTACGGCATCGCGGGGACCACTTCCGGTGAC
ATGATAAAGTTCTCCATCAACTATCCGTCTGACCCAAAAGTCTCCGTGGCTGATTGCAAA
CCTTCTCTTATCGGCTGTCTAGCGAAGTGTGGACCTTGGAAGAAAGGAAAACGGCCGGAA
TCTTTATGCTATAGTCAAGGTATAGAATCAATCCTCATTATGACTGACGGGTGTCTGATA
GTCGGTGCCGGGGACGGTACCATCGACATCCTCGATGAGATAAATTGGAAAGGAGAGTTT
CCCAAAGGAAAAATACTTGATCCAAACAAACCTTTCTTTAAAGCTCTAAGAAGCACAAAA
CTTGAAGGTAGCATCACGTCTCTGGAGCTGATGGAGTCTCCGTCGGTCCGCGGCCCGAGC
CGGCTCCTGCTGGCCGGGACCCGCACCAGTGAGATATACGCCATCAACGTGGACACCTTC
GCACCCACGCTGGTCGTCACGTGCCATCGATGTGCCATCAACGATATAGCGTTTCCCAGA
GGTATGTCGGGCGTGTTCGCCACAGCGGGTGCGGGTGACGTTCGCGTGTGGTGTACCGAG
TCCGGTATCGAACTGCTCCGTATCGTGGTGCCTAACTTCGTGTGTTCCTCCCTGCTGTTC
ACAGACGACGGGAAAGCTATCGTTACCGCGTGGAACGATGGCAACATACGAGCGTTCACT
CCGCTCAGCGGCCGTCTGATCTACTGCATCTACAACACACACAACAAGGGGACATCCGCC
CTGGACATGACGCACGACGGACGGACTCTCATATCTGGAGGCTGCGAGGGCCAGGTCCGC
GTTTGGGACATCAGACCCGAATGCCAGAGTCTCAAGAAAGTGCTAAAGGAACACAAGAGT
CCGGTGTCCGCCATACAAGTGTCGCCCAACGACACGGAGGCCGTCAGCGCGGGGACCGAC
GGATCTTGCATTATATGGGACTTGATTTCGTTGTCTCGTCGCCAGGTCATGTACGCGAAC
ACTCTGTTCATGTGCGTGTGCTTCGAGCCGCGAGGAGTGCAGCTGCTGACGGGAGGCACG
GACCGACGAGTGGCCTACTGGGAGGCGGGCAGCGGCAACCTGGCCAGGGAGCTGGAAGCG
AGCAAAGTGGGAGCTATAAACGGAATACATATAACACAGAAAGGAGACCTATTCGTGACC
GGCGGCAACGACCAAATGGTCAAACTGTGGAAGTATCAGGAGGGTATTTACACTCACATG
GGTCTGGGTCACGCGGGCGCGGTCACTTCCTGCCGGTTCAGCCCCGACGCCAAGGTCATC
GTCAGCAGCTGTGCGGCCGGGACTATCATAGTATGGAAGGTGCCCGAGATGTACGTCAAC
GACGATAAGCAATCGTCTGGACGAAAAAGTTCAGGGGAACCGAAAACATTACAGGAGGAG
TTACAGCTTCCCTTAGATGATAAACCCGTCCACAAGGCGGCTGGCGACCGACCTAACAAG
TTACCGGCCGCGCCTTCCAAGGTCGAGAAGATCGCTTCTATAGATACGAGTCGAAGTAGC
GTCCATTCGTGTTGTCCGTGCGACTCGGCCAAATCTAATCAGTCCAAAAAAACTACACCC
AAGAGTGGCCCCAAGTGTTGTCGACCGCCGGGTGAGATGGTGACACTGTTTAATATTTAA
Protein sequence:
MDVKNLEPCSIIGFDGSAIKGLNVHPDGDHIVYPIGNKVCIQEWKSKKMYFLSGHTNSVS
TLAISPKGTYVGSGQINHIGFKASTKLWDFKKKVLIGTHELHKVRVEALSFSSDERYMIS
LGGRDDGCIVLWDCVAGAATGTAAAAKLTTGDAMTLVPLSLRVNSFVTGGDSNLRVWNIR
AGSKNLDVVDVSLGKLRRCVRCITVSNDDTYGIAGTTSGDMIKFSINYPSDPKVSVADCK
PSLIGCLAKCGPWKKGKRPESLCYSQGIESILIMTDGCLIVGAGDGTIDILDEINWKGEF
PKGKILDPNKPFFKALRSTKLEGSITSLELMESPSVRGPSRLLLAGTRTSEIYAINVDTF
APTLVVTCHRCAINDIAFPRGMSGVFATAGAGDVRVWCTESGIELLRIVVPNFVCSSLLF
TDDGKAIVTAWNDGNIRAFTPLSGRLIYCIYNTHNKGTSALDMTHDGRTLISGGCEGQVR
VWDIRPECQSLKKVLKEHKSPVSAIQVSPNDTEAVSAGTDGSCIIWDLISLSRRQVMYAN
TLFMCVCFEPRGVQLLTGGTDRRVAYWEAGSGNLARELEASKVGAINGIHITQKGDLFVT
GGNDQMVKLWKYQEGIYTHMGLGHAGAVTSCRFSPDAKVIVSSCAAGTIIVWKVPEMYVN
DDKQSSGRKSSGEPKTLQEELQLPLDDKPVHKAAGDRPNKLPAAPSKVEKIASIDTSRSS
VHSCCPCDSAKSNQSKKTTPKSGPKCCRPPGEMVTLFNI