| New model in OGS2.0 | DPOGS200553 |
|---|---|
| Genomic Position | scaffold172:- 9468-21658 |
| See gene structure | |
| CDS Length | 4980 |
| Paired RNAseq reads | 295 |
| Single RNAseq reads | 811 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010767 (3e-119) |
| Best Drosophila hit | defective transmitter release (5e-60) |
| Best Human hit | leucine-rich repeat-containing protein 50 (6e-72) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_82905 [Branchiostoma floridae] (6e-93) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_82905 [Branchiostoma floridae] (1e-81) |
| GeneOntology terms | GO:0042995 cell projection GO:0005929 cilium |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | MCL30970 |
Nucleotide sequence:
ATGGCTACGCCGACTGTTCAAGTGGATGATGAGTATAGGAAAGTCAAACGTGCTGAACTG
GAAGAGTTTTTTAAAGATCTGGATATAAAGAAAAAAGAGTTGGATAAGATAATAGAAAAT
GAGTTTGAGGTATTGAATGAAACGGTACAGAACCAGGATAGACCATACATCGCCGCATCA
GCTCCAGGCACCGTTAGAACTGAGTATGAAGTGATGGCAGGTCAACCATTCACGGAAATT
GGAGACCACTATAAACCATTATCCGACGAGGAAATTAAAAATGTGACTGAAAATAATCCA
ATTTTAGCTGAAAAAGCAAAGCAAATCCAAATTGTGATTAACTCGGATCGTAATAATAGA
GACATGATGATACCATTAAATCAAATAAATATTTCTAATTATGATGAAATAAAAGCTGAA
TTGAAATCAGCTGCAGGTGATCCAGACCAAATAAATAGGATAAAATTCAAACACATGAAG
GCTTTATTTAATTCAGCAGAAAATTACAAAAACGATATGACTAATCAGAAGCAGATTGAT
AAAGAAAAAGACGAAGAAAATATGATAGACGATTCTTCAAGTGATGAAAAAGAATTTGAA
GCTATTGATAAATGTGTAACAGAATGTACAAATAAATCCTATGAAACAAGGTTTCAGGAG
ACTAAACAGATGCTGCTGAGAGTAGCTGATAAATATGACGATCCCAATATATCAGAGAGC
GAGAAGAGTAAGCCTAACGAAGTAGAAAGTTACCCGATTCTTAAGAAATCTTCATCATGT
TTAATTAAAGCGCCAAAGCAATGCTCTATTTTGCAAAAAGTTAAAGAAACATATGCGATT
AATAAAGCTATGAATATACCTCTACAAGACAACCCGGTAAAACTAAACCTTAGTCGAAAA
CCAGAGGAAAATGTCAAGAAACAATTTGACATAAAACATTCAGCAATGCTAGAAAAACTT
ACAGATACTAAAGAAGCCCTCTTAAAAATTGATAATATTTTGAGCGATTCAATTCCTGAC
GAGGATAAAGATGATAATATGAAAGATTCTGTTAATATCATCGAAATTGAGAACGCAAAC
CATATTGTTGAAAATAATGAGGTTCCAAGTAAAGATTCCCAAGAAAAATTCGATGAGAAA
ATGGAAGTAACACTACAAAATGCACTGGAAAATATTTTTGAAATAGGCAAGAACGAAAAT
AAGGAAAATAATGAATTAGAATTCAAAGAAATGAAAAGTTTGGCTCGAAACATTGTTGAA
GGTGCTGAAAATCTCAGCACTCTTATAAGAGAAGATATAACTAACAAACTTAACACCATG
AATGAACTCTTAAATGATGTCAATGAAGCATTGGAAAATTCTAGGAAATCTAATATCGCA
TACCAGAAGCTTAAAGAAGAAGGAGAGGTCCGCAAACGGGTTAAAGAAATAGAAGGAAGT
AGAGAGGGACATAACTCTGATTTGAGTTCTGTATCCGTTGTGGATATTGATAATATAAAT
CAGGCAATTTCAAAAATTAACACTGAAATAGAATGCCAAGAATCCAGAGTTAGCACTAGT
CGAACAAACTATGAAGCGAGGAGTAAAGAGTGTCAAGATTTCATTAAAGAAGTGGATGTG
ATTTTAGAAAAATCTCACAAAATTCTACACCCCTGCGATTCCAAACTTCATGAAGATAAT
AATATTACAGGCGATTCTGTAAAGAGTAATGTTGGTGACCGTAAGGAGTTGTGGGACGTA
GATTTAAAGATAAATAAAACCAAAATAGACAACATACAGAAGCAAAATATGGAAAGGAAC
AAGAGAATTGATAACCTATTGTACGATATTAAGGATAAAATGAAGGATAATAAAGAAGTA
TTAAGACTAGCAAATAATTTACTGAGGCGAGAAGAGGGCAAGAAGAAGTTACAAGAGAAA
AAAGCATCTGAGACACCGCATATTGAACATGATGATAGAGCTATGGGAGATCATGTTGGA
GTTGAAGAAAATAAGGATGATAACACGAAAATTCCTTCGTCTGACATTCAGATTACAGTC
CAAAAAGAAGAAGATATAAAGATGGAACAGACTGAAAAAGAGAAGCAAAGAGAATTCCAA
TTAAAGCTTGAAAAGGAAATAGAAGACAAAGGTCCCAGGATGACAAAACAGTTTATAAAA
AATCATTGCAAACAACACAAGTTGTATTCTACACCGTACCTCAATGACATTTTATATTTA
CATTTTAAGGGTTTTTCGAAAATTGAAAATTTGGAAGAATATACTGGTTTGAAATGCATT
TTCTTGGAAAATAATGGTATCCAACGCATTGAGGGTTTGGATACATTATCGGAATTGAAA
TGTCTTTACCTTCACTATAATGTCGTTAGAAAAATCGAGAATCTCCAAGGATGTCCTAAA
CTTGATACACTTAATTTGGATCACAACTATGTTAAGAAGATTGAAAATTTAGACGTCGTT
CCTGACTTGCATACTTTAAGTCTTGGCCACAACATGTTGGCCACCGTCGAGGACTTGGAG
TCATTGAGATTATGCAACAATTTGTCGGTATTAGATCTATCTTATAATCGTTTAGAGGAT
CCTCTTATTGTGGACGTATTGGCTGACATGGCGCTTTTAAAAGTGCTAGTCCTAACCGGT
AACCCTGTCGTCCGTAACATTCCCGCCTATCGCAAAACGTTGACTCTCCGTCTCAAGGAG
CTCCTTAACCTGGACAACCGGCCCGTGTTCCCTCGAGACAGAGCCTGCGCTGAAGCCTGG
CAACGAGGAGGAGTCCAGGAGGAGATAGCGGAGAGACGCCGTTGGATAGCCAAAGATCAA
GAGAAGGTGATGCAGAGTGTCCGCTACCTTATAAAGATGAGAGACGAGAATAAACAAAAG
AGAGAGGCTCGGGAACGGGAAGAGAGAGAGAGTCTCGGCCTGCCACCAGTCGTGCTCGAG
GATGGCACCATCGATCCTAAGGAGGCAAATGCCGATGAGTTTGTCGATGATACTAAAGTA
AACGAAACTGAAAAGAAAGACCAGTCTGGTGTCGTTTCGGACATGCTCTCCGGGTCCGAG
GCTGAAGACAGCACGAGCGATGAAAGTGATTCAGACAGCGATTCCAGTGAAAACAAAACA
GAGATGGGAAAAATAGAATGGTCTCAGGTTGATCGCGGCAAACATCTCATACAAGAATTG
AAGGAAGAACAGACACCAGAGGAACAGTGGTCGGGTTTCGGGTTAACTTCCACCGCAGAC
ATGAAGACTTCAAGCGAGTTACAAGCTATCAGTAATTTGTTATTCAATGAACCATCTCAC
GTTGAACCTAAGAGAGTGTCACAGACATTACAAGAATCGAGAGAAATATTAAAGGAGGCA
TTCAACACTGGTGAAGTAACTGAAGAAGAAATGAAAACTGATGCGAGACGAAAACCACTT
ATTGAGATATTGGAAGAATATAACAAGAGACCAAAGAAAACGGAGGAAGAATGCGTTCCA
GAAGTTATACATTTAAGCGGAATTACAGAAGAAGGTGACTTGATAGTAGACCATGATAAG
AAGCTGGCATATGAAAGACAAAACATCGTATCACCGCCAACGACTGGGGTGTTTAAAAAA
GAAGGAAGTATCAGAAAAATTAAAAAAATGAAGAAAGTTACCATTAAGCAAGTAATAGAT
GAGGAACCAGAAGACAATGAAAATAAAGAAGAGAATGATAAAAAAGATGTTGAAAATAAA
GAAAAACAAAACGAGACAGATGTTACAACTACTTCCACACAAAATATTAGTGAACGAAGA
AGAAGCATCATCCCCAGTGAAGGTCACGGTACAGCTTTTCTTAATTACATGAAACATATG
AATAAGGATCCTGATTCGAAGGAAAGTGATGATGAAGATTTGAAGCCAAGCGCCGAAGAC
GAGGAAATATTTAAGGAACTCGAGAAGGAGCAGGCGGAGAGAGAAGCTAGGATCGCTGCG
GGGCAACCAGCGGTCGACCCCATGAAGTTGTATGACGCAGCCACCATGGAAGCCTATTAC
AAACAGCTGGAGGCTCCTCCAGCGCACGCTCGGGTGACCAGGTCTCATGTCACTGAATAC
AGGCACGATAACGTTTTCGATAGGATTGCCTTGAGCCAACTCACCGGGGGAGAGAGACCA
GCTTCAACCGCTGGCACGGAGTCGATACACATTGACAGTGACAGTGATAGTGATGTGCCT
GACACTCCAGACTACAAGGATATGAAACTGAGACGACCGACATCAGCTGGAGTTAGACGA
GAAGAAAACAAAAACACCAATAATAATGTTCCACACACTAACGAACATGACCCTGCAAAC
AAATCCGTTCTGACCAACGATATGATGACAAACGACAGTAAAGAGCGGTGTGAAGCCAAA
AGATGCATCATAGACAAGATCAACTCCTACGAAGATAAAAGATTCCCGTCACAAGGCGTG
ACGGCGGACGTGGCAGAGAACGCTCGCATCGAAGACTCGGTGGCCACGGAGTTGTTGAAC
AAAACTCTCGAGATGGAAGAGCAGGAACTGTACCGACACATCGACGCCGTCAACAACCAC
GCGGGCAGAGTCGACAACAGAACCAACTCCATCATCGAGGAGATCTCGGACCAGTTACAC
CAGGAGTACACGGTAGAAGTCGGTCGCTTCCATGACACCATTAGTTGCCAGCACTTGGCG
GAAGTGTCCGAAATATTGGAGACACATGTCGAGGAAGTGGAACAGAGAAGGAGGGAGAGT
GCCATATACGAAGACGAGGAGACACCCCCACAGGAGCTCGACACGACGCTAGTGGGGGAT
GTGTCCAACGATACACTGGTTGCAACGGGAGTAGGAAGCGATTCCATGGTTGACGGGGAT
GAAGAGCTCGGCCACGCCGGGGCCAGCAACGTGTCGGCCGAGGACGACGTGTTCGAAGAC
TGCATCGAGGAGCTGCCCGACCACTACACGCTCGAGATGAAGCTGGCGCTCACTGATTGA
Protein sequence:
MATPTVQVDDEYRKVKRAELEEFFKDLDIKKKELDKIIENEFEVLNETVQNQDRPYIAAS
APGTVRTEYEVMAGQPFTEIGDHYKPLSDEEIKNVTENNPILAEKAKQIQIVINSDRNNR
DMMIPLNQINISNYDEIKAELKSAAGDPDQINRIKFKHMKALFNSAENYKNDMTNQKQID
KEKDEENMIDDSSSDEKEFEAIDKCVTECTNKSYETRFQETKQMLLRVADKYDDPNISES
EKSKPNEVESYPILKKSSSCLIKAPKQCSILQKVKETYAINKAMNIPLQDNPVKLNLSRK
PEENVKKQFDIKHSAMLEKLTDTKEALLKIDNILSDSIPDEDKDDNMKDSVNIIEIENAN
HIVENNEVPSKDSQEKFDEKMEVTLQNALENIFEIGKNENKENNELEFKEMKSLARNIVE
GAENLSTLIREDITNKLNTMNELLNDVNEALENSRKSNIAYQKLKEEGEVRKRVKEIEGS
REGHNSDLSSVSVVDIDNINQAISKINTEIECQESRVSTSRTNYEARSKECQDFIKEVDV
ILEKSHKILHPCDSKLHEDNNITGDSVKSNVGDRKELWDVDLKINKTKIDNIQKQNMERN
KRIDNLLYDIKDKMKDNKEVLRLANNLLRREEGKKKLQEKKASETPHIEHDDRAMGDHVG
VEENKDDNTKIPSSDIQITVQKEEDIKMEQTEKEKQREFQLKLEKEIEDKGPRMTKQFIK
NHCKQHKLYSTPYLNDILYLHFKGFSKIENLEEYTGLKCIFLENNGIQRIEGLDTLSELK
CLYLHYNVVRKIENLQGCPKLDTLNLDHNYVKKIENLDVVPDLHTLSLGHNMLATVEDLE
SLRLCNNLSVLDLSYNRLEDPLIVDVLADMALLKVLVLTGNPVVRNIPAYRKTLTLRLKE
LLNLDNRPVFPRDRACAEAWQRGGVQEEIAERRRWIAKDQEKVMQSVRYLIKMRDENKQK
REAREREERESLGLPPVVLEDGTIDPKEANADEFVDDTKVNETEKKDQSGVVSDMLSGSE
AEDSTSDESDSDSDSSENKTEMGKIEWSQVDRGKHLIQELKEEQTPEEQWSGFGLTSTAD
MKTSSELQAISNLLFNEPSHVEPKRVSQTLQESREILKEAFNTGEVTEEEMKTDARRKPL
IEILEEYNKRPKKTEEECVPEVIHLSGITEEGDLIVDHDKKLAYERQNIVSPPTTGVFKK
EGSIRKIKKMKKVTIKQVIDEEPEDNENKEENDKKDVENKEKQNETDVTTTSTQNISERR
RSIIPSEGHGTAFLNYMKHMNKDPDSKESDDEDLKPSAEDEEIFKELEKEQAEREARIAA
GQPAVDPMKLYDAATMEAYYKQLEAPPAHARVTRSHVTEYRHDNVFDRIALSQLTGGERP
ASTAGTESIHIDSDSDSDVPDTPDYKDMKLRRPTSAGVRREENKNTNNNVPHTNEHDPAN
KSVLTNDMMTNDSKERCEAKRCIIDKINSYEDKRFPSQGVTADVAENARIEDSVATELLN
KTLEMEEQELYRHIDAVNNHAGRVDNRTNSIIEEISDQLHQEYTVEVGRFHDTISCQHLA
EVSEILETHVEEVEQRRRESAIYEDEETPPQELDTTLVGDVSNDTLVATGVGSDSMVDGD
EELGHAGASNVSAEDDVFEDCIEELPDHYTLEMKLALTD