| New model in OGS2.0 | DPOGS208327 |
|---|---|
| Genomic Position | scaffold1165:- 36351-40756 |
| See gene structure | |
| CDS Length | 1752 |
| Paired RNAseq reads | 538 |
| Single RNAseq reads | 1323 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004039 (4e-64) |
| Best Drosophila hit | CG14230 (6e-22) |
| Best Human hit | nucleolar protein 8 (1e-09) |
| Best NR hit (blastp) | 50kDa lectin [Bombyx mori] (2e-76) |
| Best NR hit (blastx) | 50kDa lectin [Bombyx mori] (7e-76) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0008150 biological_process GO:0005575 cellular_component GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL17414 |
Nucleotide sequence:
ATGGCCTCAGCAACAAGATTATTTGTGAGCAATTTACCGGAAAACATTGATAACAATTCC
CTAAAAGACATATTTTCTTCCTACGGAGAAGTAACCAACTTTGACTTGAAATCCAAGCCT
GGTGTGGAAAATGATAAAAAAACATTTGCGTTTGTAACAATTTCTGCTTCCAACTATAAC
GTGGAATCGTGTATAAAATACTTCTCTGATAATGACTTTCAAGGACACAAATTGTATGTG
ACGAGAGCCCGTGAAAGCTTTTTAGAAAGACTTCAGAGGGAAAGAGAACAAGCTCAAAAC
AAGACATCGGGGAATGAACCAATAAAAGAAAATAATGCCAAAATATTCATTAACAGCAAC
CAGAACACACATAAAAGAAAATTTAATGACCTGAATGAAACCCCAGTAAATATAAAAACA
AAATCTAAGAAAGCAGAAAACAATTTTGACTTTAAAAACAAAAATTTTAATAAACACCAA
AACTTCAATGGCGATGTAGATAATTCAAACAGTTTTAACTCTATGAAGAATAAATCATTT
GAAAATGATGAGAAGAAAATGAGTTCGGATAAAAAGAGACTAGAGTCAATCAAGAAGAAG
CGCCAAGAGTTTAATGCAAAGAAAAACATAATTAAAACTGGCCTCATAAGTATTGACAAG
CAACAAAATAAGAAAGTTATATTTTCCGATAATGAAGACGAATGTTCAACTAAATATGAT
GCAGGTGTTGATGATATTAAAACTTCGAAAGAGAAACCGAGTTTGTTTGATGATGCTGCC
AGTGATGATGAAATAAACTTTGATATAAAGGAACAATTTGAAGGGAAAAAGGGTAAAAAG
GTTTTAGACTTACAGTCCACATACAAAGCTGACAAACGTTTCGTCTTGGATGAAAGATTT
GTTGAGGATGAATCAGCGAGCGATACTGAAGCCGGTCATGCCGAAGAAAATGTTGAAATA
GGCCAAGCCGACGAAAAATCAAAACAACTGGATATATTGCAAAATTTGTTAGGTGTGACC
ATTAAAACAAAACAACCAGAACTAGCTAACAAAACAAAGCAAAAACTTGGTATGCTGAGA
TTTGATCCATCACAGCCAGAACATGCAAAATATTTAGCGCCGGTCGGGGAGAGACCCGAA
CAGACAAAAAAAAGTAAAAAAAAGAAAAAAGATGCGGAGGTTGCGGAGGTTGCGGAAGAG
GAACCACAAGAAACACAAAGTGTTGTTGAAAAAGTGGAAGTTTCCAAAGAACAGTTCTAT
AAGATTACTGATGATTTGAAGGAAGCAATAACACAACCACAAGAGTTCAGCTTGAGGAGT
CTCTTTGCTAAAGACGATGTTCAGGATGAGGGAGACGAAGACGAAGGCAAGGTTATTCCA
CTTCAAACTAAAAAGAAAGACAAAGTCAAAAATCCGTTAGAACCTGATGAAAAAAACCCG
TTTGTGTACGATTCATCTGATTCCGAAAACGAGGAAGAAGCCTTGAAAACTACTGAAGTA
AATGATACAACCGAAAAACAGGAAACAAAAACTGTTTGGAGGGAAAATTTATTCTTCACA
AACTCTGATTATAGATTAAAAGATGGACTCCTGTTCTTTACTAAGCCACAAGAAACGGAG
GTACAAAAAGACAGAAGAGAATTGAAATCTTTAATGAAGAAGAGAATTTACAATAAAGAC
CGCAAAAATACTATGTTCCAAAAGAAAATTGGTGGACGCAAGAAGACCATGAAAAAAAAA
TTCAGAAAATAA
Protein sequence:
MASATRLFVSNLPENIDNNSLKDIFSSYGEVTNFDLKSKPGVENDKKTFAFVTISASNYN
VESCIKYFSDNDFQGHKLYVTRARESFLERLQREREQAQNKTSGNEPIKENNAKIFINSN
QNTHKRKFNDLNETPVNIKTKSKKAENNFDFKNKNFNKHQNFNGDVDNSNSFNSMKNKSF
ENDEKKMSSDKKRLESIKKKRQEFNAKKNIIKTGLISIDKQQNKKVIFSDNEDECSTKYD
AGVDDIKTSKEKPSLFDDAASDDEINFDIKEQFEGKKGKKVLDLQSTYKADKRFVLDERF
VEDESASDTEAGHAEENVEIGQADEKSKQLDILQNLLGVTIKTKQPELANKTKQKLGMLR
FDPSQPEHAKYLAPVGERPEQTKKSKKKKKDAEVAEVAEEEPQETQSVVEKVEVSKEQFY
KITDDLKEAITQPQEFSLRSLFAKDDVQDEGDEDEGKVIPLQTKKKDKVKNPLEPDEKNP
FVYDSSDSENEEEALKTTEVNDTTEKQETKTVWRENLFFTNSDYRLKDGLLFFTKPQETE
VQKDRRELKSLMKKRIYNKDRKNTMFQKKIGGRKKTMKKKFRK