| New model in OGS2.0 | DPOGS209531 |
|---|---|
| Genomic Position | scaffold2488:+ 12400-17259 |
| See gene structure | |
| CDS Length | 1779 |
| Paired RNAseq reads | 302 |
| Single RNAseq reads | 939 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013854 (2e-60) |
| Best Drosophila hit | CG12736 (2e-145) |
| Best Human hit | elongation factor Tu, mitochondrial precursor (2e-117) |
| Best NR hit (blastp) | GL20115 [Drosophila persimilis] (1e-165) |
| Best NR hit (blastx) | mitochondrial translation elongation factor Tu [Glossina morsitans morsitans] (6e-152) |
| GeneOntology terms | GO:0006412 translation GO:0005739 mitochondrion GO:0003746 translation elongation factor activity GO:0003924 GTPase activity GO:0006414 translational elongation GO:0005525 GTP binding |
| InterPro families | IPR000795 Protein synthesis factor, GTP-binding IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPR004161 Translation elongation factor EFTu/EF1A, domain 2 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IPR005225 Small GTP-binding protein IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel |
| Orthology group | MCL18288 |
Nucleotide sequence:
ATGACTGGAAGTCTTATATTCCGATGTATAATAAGTAGTGTATCTCCAAAGTTTTCATCG
AAATCTAAATTATTAAGAAGCAGTAGATTGACTGCTGGTATTTTAAACGGTTCTTGTAAC
TATTGCACGAAAGTTAAATCTAAGGTTGTAGAGAAAAAACATTGCAATGTAGGAACTATA
GGGCATGTCGATCATGGAAAAACGACACTTACAGCTGCGATAACCAAAGTTTTATCTAAA
GGTGGTTTCGCGAAATATGTTTCTTACGACGAAATTGATAAGGCCCCGGAAGAAAAAGCA
CGGGGAATTACGATAAATGCGGCACACGTAGGCTACAGTACGAATAACAGACACTACGCT
CATACTGACTGTCCGGGACATGCAGATTATATCAGAAACATGATATCGGGAGCGTCCCAA
ATGGATGCAGCAATTGTTGTAGTCGCAGCCAACGACGGGCCAATGCCGCAAACAAAGGAA
CATTTGTTGTTGGCCAAACAAGTCGGAATCAAATATGTTTTGGTGTACATAAATAAAGTT
GATATCGTAGATAATGAATTAGTCGAATTAGTAGAGATAGAGATGCGAGAAATGTTGACA
GATTATGGCTTCGAAGGTTTATCAGCACCTGTGGTTCACGGCTCAGCACTCGCCGCCTTA
AAAGATGATCAAACTGAAATAGGGGTTCCCTCTATAATCAAACTCTTGGACACTATGGAT
AATTACATTCCACCAATCATACGAGATCTAGAATCACCATTTCTTCTGCCCATAGACAAC
GCTTTCACAGTACCGGGTAGAGGTACTGTTGTTGTTGGAACCATAAAAAGGGGTGTCATG
AAGAAGAATGATGAGGCAGAGCTCATGGGATTCGGCTATAATATTAAGACAACACTATCT
GATATACAGATATTTAGAAATAGTGTGCCCAAGGCACTGGCTGGTGATAACGTGGGCGTC
TTACTTCGCGGTATGAAACTCAAGAACGTTGAGACCGGCATGATCCTGTGTGCGGCGAAG
AGTTTGAGCCTGAGCAATCATTATAAGGCGAAAGTTTATTTCCTGAGTCACTCAGAAGGA
GGGAGAAAAAAGCCTGTCTTTTCAAAATACACGCAACAAATGTTCAGCGGAACGTGGAAT
ATTGCTTGCAGGATAGATTTAGAGCCTTCGATGGAAATGTTAATGCCTGGTGATCACGCG
GACGTCTTCCTCACCCTGTTAGAGGGCATGGTGATGGTCAAAGGACAACAGTTCACCATC
AGAGAGAACAACGTGACAGTTGCCACGGGCATCATAACGGACGCTATGAACGCCATAGAC
GTGCCCAACGGGAAGCTAGGGAAGATCGCACTGGCTGGTGATAACGTGGGCGTCTTACTT
CGCGGTATGAAACTCAAGAACGTTGAGACGGGCATGATCCTTTGTGCGGCGAAGAGTTTG
AGCCTGAGCAATCATTATAAGGCGAAAGTTTATTTCCTGAGTCACTCAGAAGGAGGGAGA
AAAAAGCCTGTCTTTTCAAAATACACGCAACAAATGTTCAGCGGAACGTGGAATATTGCT
TGCAGGATAGATTTAGAGCCTTCGATGGAAATGTTAATGCCTGGTGATCACGCGGACGTC
TTCCTCACCCTGTTAGAGGGCATGGTGATGGTCAAAGGACAACAGTTCACCATCAGAGAG
AACAACGTGACAGTTGCCACGGGCATCATAACGGACGCTATGCACGCCATAGACGTGCCC
AACGGGAAGCTAGGGAAGATCGTCCTCGACACTAATTAG
Protein sequence:
MTGSLIFRCIISSVSPKFSSKSKLLRSSRLTAGILNGSCNYCTKVKSKVVEKKHCNVGTI
GHVDHGKTTLTAAITKVLSKGGFAKYVSYDEIDKAPEEKARGITINAAHVGYSTNNRHYA
HTDCPGHADYIRNMISGASQMDAAIVVVAANDGPMPQTKEHLLLAKQVGIKYVLVYINKV
DIVDNELVELVEIEMREMLTDYGFEGLSAPVVHGSALAALKDDQTEIGVPSIIKLLDTMD
NYIPPIIRDLESPFLLPIDNAFTVPGRGTVVVGTIKRGVMKKNDEAELMGFGYNIKTTLS
DIQIFRNSVPKALAGDNVGVLLRGMKLKNVETGMILCAAKSLSLSNHYKAKVYFLSHSEG
GRKKPVFSKYTQQMFSGTWNIACRIDLEPSMEMLMPGDHADVFLTLLEGMVMVKGQQFTI
RENNVTVATGIITDAMNAIDVPNGKLGKIALAGDNVGVLLRGMKLKNVETGMILCAAKSL
SLSNHYKAKVYFLSHSEGGRKKPVFSKYTQQMFSGTWNIACRIDLEPSMEMLMPGDHADV
FLTLLEGMVMVKGQQFTIRENNVTVATGIITDAMHAIDVPNGKLGKIVLDTN