| New model in OGS2.0 | DPOGS210726 |
|---|---|
| Genomic Position | scaffold1390:- 19408-52820 |
| See gene structure | |
| CDS Length | 6075 |
| Paired RNAseq reads | 656 |
| Single RNAseq reads | 1433 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006338 (1e-104) |
| Best Drosophila hit | CG6129 (0.0) |
| Best Human hit | rootletin (6e-42) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC000358 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000358 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0035253 ciliary rootlet GO:0030528 transcription regulator activity GO:0005634 nucleus GO:0045449 regulation of transcription GO:0000166 nucleotide binding |
| InterPro families | IPR010989 t-SNARE IPR009053 Prefoldin |
| Orthology group | MCL12609 |
Nucleotide sequence:
ATGTCCCAAACAAGAAAATCTCTTAATAGACCAAGATCTAGGCTACCTATAGACGAAGAA
ACCGTTAGACTGTGGGATCTCTCCAGTAATGAAAATGCAAGTGACCAAAAAACAAAAGAT
GCATCAACAAAAACTGAACGCAACGATCGTAAACTTGTGGCGGACAGTTCTAAGGTTGGT
GAAATAGAGAGGGATATAACACTCGAGGTAATGAGGGAAAAACATTCAATAAACAAACAT
CAATTGGCAGGGACCATTAGAAATTCGATAAAAGAAAAATTTGACAGCAAAAAGACAACT
AAATCAGAGCCCTATGCTGTTCATCTTAAAGTCGGTTATGGAAGAGATGATGGTACTGTC
ATTACGAGTAATGCGGATGTCGAAGACACATCAAATTCAAATGAAAATCGCGATGGGGTC
TGTAAAAGGAATCCGGGCTCTATTGTTAGAAAGCGGAGAGTCGATGTTCGTGGAGCGGAG
GCTGATAGCATCAGTCACGCGAGCGGTCTTCGGATGGGGCCAGGTGGTGCACTGGCACTG
TGTAGGTTGGAACGGAACAGTAGCGTGGCGGGCGCGGCGCTCGGACTACGCAGCGTTCAG
ACGGAAGAAATGCCGTTGCCAGCGAGGGAAAGTTTGACGACGCCGAGGAGCGTTCGTGCT
CCCATTGGTAGAAAACCAACAACTCTACCACACCAGCGTGTAAGAAAAGAAAATAAGGAG
AAATCACCGGACGGCACTGCGGAAATGGATTCGCCATTGAGTGTCGGAGGCAGCGACCTT
CGTCGTCAGAATGAAGAATTGCGGGCCCGCCTTGCCGGGGAGAGCGCTGACCACAAGCGA
CGGCTTGAGACTTATAGAAGAGCTCAGCAAGGACAGGCAGCTTTAGTGTCTCGACTACAG
GCTAAGGTTCTGCAATACAAGCAAAGATGTGCCGAACTCGAAAGTCAGATGTTGGAGACG
CCGCGCAGCGATCCTCAGGCGAGTTACCGGTCTGCGATCGCACTACCAGCAGGCCCGGTC
GAGCGCAAAGAGGAGAGGATCGCGGACCTGGACACCGCGCTCAGGAAGATCGAAGAAGAG
AAACACAAATGTGAGAAATTGGTCTCTCAGAACAATTTACTCAGGGAGCAGCTAGAGGAA
TCCCACCAGCTCAACGAGGCTCTCACTAACGATCTCCAGAAACTGACCAACGACTGGGAA
ACACTCCGGGATGAGATGGCTATCAAGGAAGACGAGTGGAAGGATGAAGAGCAGGCCTTC
AATGATTACTACTCGAGTGAGCACAATCGTCTTCTCAATTTATGGCGTGAGGTTGTGTCC
GTGAAGCGTTTCTTCTCGGAGACTCAGAGCAACACTGAACGAGAACTCTTCAAAGTCAAG
AGTGACATAGACTCGGCCGCCAGAGAACTCGTCGGTACCTTGAGCGGTTTTGCTATCACC
GCGTATGCTCAAGGAGCTAAACTGGAGCCCCTTCAGACCCAGCTACCACAAGCCTCTTCA
CCTTCACCGCTGGAGAATCTCCGTGTAGAGCTGCATACTGCAACCTCACAGAGAGATGCT
GCACAGTCGGAGTTAAGAGAGAGAGATTCCCGGATACAGAGACTGCTGGAAGACCTGCAA
GCTTTGGAGGATCGCTGTGAGGCTCTCTCCAGTGCTGATGAAGAGGTCCGCGTTCTGCGA
GCCGCCCTCGAGGACGTGGCCAGGGCGCTCATACAGGACTCGGACGAGAGAGGCGGAGTC
GCTGAACATCATCGTCCGCGGTCCCCCGGCCGAGCCTCCGGATGCAGCACGTTGTTCGCT
GAGAGCGCCGTCAGCGCGCTGCACGCCGCGCTCAACAAATACCAAATACAGATCCATGAC
TTACAGGTTCGTCTCCAAAACGCCCGCGAGCAACTGTCGGCGTGTCGGAAAAGCTGCGAG
GTCGGGGACACCAACAACTCGACCCTGGAGAAAAAAGTTCAGGACTTACAAGAGAAACTG
GACCAATCCAACTCGGATCTGAACCAGCTGGTCCAGGAGAAGGAGTCCATGCTGAAGACC
ATCGAGGCTCTGAGAGCTGATAAGAATAACCTCGAAAGGAATCGACTTGAAATTAATTCC
ATGGTCGAATCTCTCACATCTGATTACGAGAAACTCCAGAAGATGAACACTCGCTTGGAG
AAGAATATAGAAGTACTGTTGAATGAGAAGAGGGATTTGAATTGTGAAGTGGATCGCTTA
CATAGAGAGGGAGCCAGCAGGGAGGCTGTGTTACGTGGTGAAGAGGAGCGCTCGGGTCGC
CTCAGATCTGAGCTGGTATCTGTCCGTGAAGACCTGCACAAGGAGGCGCTGGCGAGGGAG
CTGCTGGAACAGCAGAAGATCGAGGGGGACGGACTGCTGCAACAGCTGGAGAAACATAGG
AGTGAGCTGGAGATAGAACTGGAGCGAACTCTGTTAGAGCGCAGTGACCTGCAGGACCTC
ACAGAGAAGTTGCAGACGATTGTTAGAAGCCTGGAAGATGATAAGAAGAAACTTTTAGAA
GATCTCAAACAGATGGAGACAGACAAGTCATCTCTTCTAAATCAATCGTCAGAACAACAG
AGCGACATGAACTCTCTGCGCAAGGAGTTGCTGGCGGCTGAACAGAATCGGATGGAGGTG
GAGGCTGATAAAGCGAGTTTGCAGGAAAAGATAAAGTTCCTGGAGGGAGAGAGAGAGAAA
GTAGAGATAGAATTGAGACAGGTGATGAGAGAACGCGGGGAGCTGAGCTCGCAGCTGACG
AGTATGTCACGTAAGAAGGAGTCTCTCAATGAGGAGATGATGAGACTCCAACAACGGCTG
GAACAGGCGGGAGAGACCATCGGCCGACTGAACAGGACTCTGGATGACAGGGTCAAGAAC
GGGGAGGAGAAACAGATTCTGATCGACAGTTTAGACAAGGACAGGCAACACCTGCAGGAG
CAGCTGGCTGGAGCTCGCTCGGAGAAGGACGCGCTGGAGGCGGCGCTGTTCGAGGCCAGC
ACAGCGCTGGAAGACGCCGACACGAGGAGAGAAGCCCTCACCGCCGCTATGAACGAACAA
GCGCTCCTCGTCGAGAACTATAAAGGTCAAATAGCCCGTCTATCTAAAGACCTGGAAAAT
AGCGAGAAGAAGCTTCGAGAAACACGTAACAGTATGACGCAGTCCTCGGGGAAGAAGGAG
GCGGAGTATCAGACGGTCATAGCCAACCTCAACAAGACCACCACAGACAACATCACCAAA
CTCAAAGAGGAAAAGGAACAACTTCGTCAATCGCTGGAGCAAAAGCTCAGTCAGACCATT
GCGGCGTTGACGAGCGAGAAAGAAGCATTTGAGGCTAGTGCGAGGGAAAGAGAGAAGAAA
CTCCTGCTAGCCAGGGACCAACTGATACTGCAACATGATGAGGCCATGCTGAGGGCAGAG
AACGACAAACAACAGGCTCTACTGATGGCTCACCAGGAACACCAGGCCTTGATCGAACGT
CTGGAAGAAGCGAAACGAATTCTGTCATGCGAACAGAACAAGCTGGAACGAGTCAAGAGA
GACGCTCAGGCTAGGTTCGAACACGACAGGAACCATATCAACCAGCTGAAGGATGACCTG
TCAGCCTTGAAGACCAGACTAGAGGAAGCCAAAGCGGCAGCGGAAGACGAATGTGTCCGT
TATGAGAACAGAATTAAGGAGATTCATTTGGAGAAAGAAGGAGTTAACCGGGAACTTCAG
GAAACCAAGGCGGCGCTCTCACTGGCGGAGGATAAATACGACGGGGCGTACGGACAACTG
CAGGACACCTTGCGGAAATTGAAGGACTTGGAAAATGAATCGGAATGTCTTCGCAAGGAT
CTGACGGATGTGCGACGTCAACTGAGTCAATGTAGCGCTGAGAGAGACAAATATAACAGC
GCTTGTAGAGAGCTGAGAGATCACGTGAAGAGAGCTGAACACGAGAGGAGGGAGGCTGCG
AGGACCAGGGATGAGGCGTACCAGAGAATCACAAGTTTGGAAGAAAACCGCACAACCCTA
GAGCTGGAACTGTCTCGCGTGCAGACCATGTTGAAGGAGTCTGAGAGTGGCGGGGAACAG
AGCGAGAGGGCGCTGAAGGCGGCAGAGACGCAGCTGAAGAGGGAGAGGGCCGCCCTGGAA
CAGGCGCAGCATGACATTAAAGAACTACAGTCCAGACTTCAGAATAGTAACGAGGATCGC
GAGCGTACCTCGTGCGAGGCGGGCGCCGCACGGCGTCATGCCGCCGAGCTCGAGGCCGCC
CTGCAATCCGTCCGCGGAGACCTGGCACACGCCAGGACACGAGCTGCGGGGCTGGAAGAC
GCGCTCAGGGACAGGGAACAGGAACTAGTGCTGCGCCTCGAAGACTGCAGGTCCAAGGAG
CGCAGGTTGGAGGAGCTGAAACATAACCTGGAGGTGTGTCTGGCGGACGCGACGCAGCAG
ATACAGGAGTTGAAGACCCGCGTGGGCGCCAGTGAGGGTCGTTGCCGCGCGTTGGAGGCG
TCTCTCTCTCAGAGCGAGTCCAGCCGGCGCGAGGTCGAGGCCAAGCTGTCGACGGTCGCT
CACTGCTTGAAGAGAGTCTGCGGACTCCAGGCCGATGGCAGCCTCCAGACGAGAAGACGC
CTCGCCAGCCCCTCCAGGAAGTACAGCCCGCACAGAGGTATAGTGAATGGACCTTGGGAC
TTGGGCTTAGAGATCAAATTACGACGCTCGTTCATTGAACAATCTATTTACCTTTCTTAT
GGAGTCCATGAATATTTCTCGCTAACACGGACGTTTCTCAAATATCTTCCGAGCAACTTA
TCCGTCGCGATCATTCTGAGGATTAGAAATGAAGTCATAGACGTGGACCCGGAGATGATC
AAGAAGGGAGTCAAGAATCTGATGCACGAAGTGTGTCAGATCGAACGGGAGAGGGACGAC
TGTAAGGCTCAGCTGTCAGTTCTAAAGAAACAGCTGAAAGAAGCGACGGAGCAACAAGGG
AAGGGCGAGGGAAAAGTACCATCCGCTACTAGTACCCGCGTGGGCGCCAGTGAGGGTCGT
TGCCGCGCGTTGGAGGCGTCTCTCTCTCAGAGCGAGTCCAGCCGGCGCGAGGTCGAGGCC
AAGCTGTCCACGGTCGCTCACTGCTTGAAGAGAGTCTGCGGACTCCAGGCCGATGGCAGC
CTCCAGACGCGAAGACGCCTCGCCAGCCCCTCCAGGAAGTACAGCCCGCACAGAGGTCGC
GATCATTCTGAGGATAGAAATGAAGTCATAGACGTGGACCCGGAGATGATCAAGAAGGGA
GTCAAGAATCTGATGCACGAAGTGTGTCAGATCGAACGGGAGAGGGACGACTGTAAGGCT
CAGCTGTCAGTTCTGAAGAAACAGCTGAAAGAAGCGACGGAGCAACAAGGGAAGGGCGAG
GGAAAAGTGCAGGCACTGAACAACAATCTGAGAGGAGTTCAGGAGGAGAAAGCCAGACTA
CAGGCGACGCTGGGCCAGAGAGATGTTCAGATAACGTCCTTGAACGAGGTCGTGCAGACG
AAGACGGTTGAGGTCAGCAGTCTCCGCGACAAGATCACCAGCTTAGAGGCGACGCTCGCA
TCCCTCACGGAGGAAAAACTACACACCGGGAACAAGTCTGAAAGCCTCCGAGCGCAACTC
GCGGAGAGAGTGCAAGAGGTCGCTCAGCTGCGGGAGGCTCTCACCGCCGCTGAAGCTCGT
GCCTCCCGGCTGGACGTGCGTCGCGCTCAGTTGGAGGGAGACGTGCAGAGAGCCGGCGCC
GCCGCCAGGGAGAGGGAATCCGCACTCAAGGTCCGCATATTGATGTATGGCTACACCCGC
ACCATAGCTTCCTTGGAGGACAGGTGCACTTCCCTGAAGGGTACCGTGGAACAGCTCTCC
ACGGCGCTCCAGAAAGCGGCCACAGCGGAGTCTGAACTGAGAACAGAACTCGCCAGGACA
CAGCGACTGCTGAGCGACGCTAAGAACAATGAAAATAATGTGACGGATAAGATGAGGCAC
ATGCAGAAGAGTATTGGTGAGCTTACTAGGAACGTACATATTAGAGGTGACAGCTGCGAG
ACCTGGGCCCTGTAA
Protein sequence:
MSQTRKSLNRPRSRLPIDEETVRLWDLSSNENASDQKTKDASTKTERNDRKLVADSSKVG
EIERDITLEVMREKHSINKHQLAGTIRNSIKEKFDSKKTTKSEPYAVHLKVGYGRDDGTV
ITSNADVEDTSNSNENRDGVCKRNPGSIVRKRRVDVRGAEADSISHASGLRMGPGGALAL
CRLERNSSVAGAALGLRSVQTEEMPLPARESLTTPRSVRAPIGRKPTTLPHQRVRKENKE
KSPDGTAEMDSPLSVGGSDLRRQNEELRARLAGESADHKRRLETYRRAQQGQAALVSRLQ
AKVLQYKQRCAELESQMLETPRSDPQASYRSAIALPAGPVERKEERIADLDTALRKIEEE
KHKCEKLVSQNNLLREQLEESHQLNEALTNDLQKLTNDWETLRDEMAIKEDEWKDEEQAF
NDYYSSEHNRLLNLWREVVSVKRFFSETQSNTERELFKVKSDIDSAARELVGTLSGFAIT
AYAQGAKLEPLQTQLPQASSPSPLENLRVELHTATSQRDAAQSELRERDSRIQRLLEDLQ
ALEDRCEALSSADEEVRVLRAALEDVARALIQDSDERGGVAEHHRPRSPGRASGCSTLFA
ESAVSALHAALNKYQIQIHDLQVRLQNAREQLSACRKSCEVGDTNNSTLEKKVQDLQEKL
DQSNSDLNQLVQEKESMLKTIEALRADKNNLERNRLEINSMVESLTSDYEKLQKMNTRLE
KNIEVLLNEKRDLNCEVDRLHREGASREAVLRGEEERSGRLRSELVSVREDLHKEALARE
LLEQQKIEGDGLLQQLEKHRSELEIELERTLLERSDLQDLTEKLQTIVRSLEDDKKKLLE
DLKQMETDKSSLLNQSSEQQSDMNSLRKELLAAEQNRMEVEADKASLQEKIKFLEGEREK
VEIELRQVMRERGELSSQLTSMSRKKESLNEEMMRLQQRLEQAGETIGRLNRTLDDRVKN
GEEKQILIDSLDKDRQHLQEQLAGARSEKDALEAALFEASTALEDADTRREALTAAMNEQ
ALLVENYKGQIARLSKDLENSEKKLRETRNSMTQSSGKKEAEYQTVIANLNKTTTDNITK
LKEEKEQLRQSLEQKLSQTIAALTSEKEAFEASAREREKKLLLARDQLILQHDEAMLRAE
NDKQQALLMAHQEHQALIERLEEAKRILSCEQNKLERVKRDAQARFEHDRNHINQLKDDL
SALKTRLEEAKAAAEDECVRYENRIKEIHLEKEGVNRELQETKAALSLAEDKYDGAYGQL
QDTLRKLKDLENESECLRKDLTDVRRQLSQCSAERDKYNSACRELRDHVKRAEHERREAA
RTRDEAYQRITSLEENRTTLELELSRVQTMLKESESGGEQSERALKAAETQLKRERAALE
QAQHDIKELQSRLQNSNEDRERTSCEAGAARRHAAELEAALQSVRGDLAHARTRAAGLED
ALRDREQELVLRLEDCRSKERRLEELKHNLEVCLADATQQIQELKTRVGASEGRCRALEA
SLSQSESSRREVEAKLSTVAHCLKRVCGLQADGSLQTRRRLASPSRKYSPHRGIVNGPWD
LGLEIKLRRSFIEQSIYLSYGVHEYFSLTRTFLKYLPSNLSVAIILRIRNEVIDVDPEMI
KKGVKNLMHEVCQIERERDDCKAQLSVLKKQLKEATEQQGKGEGKVPSATSTRVGASEGR
CRALEASLSQSESSRREVEAKLSTVAHCLKRVCGLQADGSLQTRRRLASPSRKYSPHRGR
DHSEDRNEVIDVDPEMIKKGVKNLMHEVCQIERERDDCKAQLSVLKKQLKEATEQQGKGE
GKVQALNNNLRGVQEEKARLQATLGQRDVQITSLNEVVQTKTVEVSSLRDKITSLEATLA
SLTEEKLHTGNKSESLRAQLAERVQEVAQLREALTAAEARASRLDVRRAQLEGDVQRAGA
AARERESALKVRILMYGYTRTIASLEDRCTSLKGTVEQLSTALQKAATAESELRTELART
QRLLSDAKNNENNVTDKMRHMQKSIGELTRNVHIRGDSCETWAL