| New model in OGS2.0 | DPOGS207622 |
|---|---|
| Genomic Position | scaffold2401:- 8882-19276 |
| See gene structure | |
| CDS Length | 2415 |
| Paired RNAseq reads | 1855 |
| Single RNAseq reads | 5408 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014544 (5e-17) |
| Best Drosophila hit | CG6860, isoform A (7e-70) |
| Best Human hit | leucine-rich repeat and calponin homology domain-containing protein 1 isoform 3 (3e-36) |
| Best NR hit (blastp) | PREDICTED: similar to SD07737p [Nasonia vitripennis] (8e-106) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL014003 [Aedes aegypti] (8e-92) |
| GeneOntology terms | GO:0007265 Ras protein signal transduction GO:0005515 protein binding |
| InterPro families | IPR001715 Calponin homology domain IPR001611 Leucine-rich repeat |
| Orthology group | MCL11079 |
Nucleotide sequence:
ATGCCATTGCAAGTCCTCCTTCTCCAGGACAACTTACTGACCAGTCTTCCTAAAGAGATT
GGCAAGATGACGTCACTAGCTGAACTAGACGCTTCCAATAATAAAATAACCCAAGTGCCG
ATGACATTGGGCGACTGTACAGGTCTACGGTGTCTGGACCTCAGTAACAACCAACTGGGA
CTGTTACCATTACAGATCACATACCTCCGCCTGGAACACCTAGATGTGAGCTGTAACTGC
ATCTCGTCTTTACCGCTGGAGCTGCGAAATATGACCACCATCATAACTCTGAACTTAGAC
AATAATCCACTCGTATCACCTCCGACTACTATTTGCATGCGCGGGCGCGTGCATATATTC
AAATATTTGGAGAACATGTCGAACAAGGATACCTTGCAGCACAGAAGGGTGGATGAGACG
AGAAGAACAGCAAAACACACATCCTACATCAGCTCACCAAACAACCAGATAACGTCTGGT
AACGCTACGATCGACTGTCTGAGACACAAACCTAGACACGTGGTCGACAGCGGATACTGC
ACGGATGGAGTAGAGAAGAGATGGTCCAATGATGGTGGCTGTGAGACGGGCGGAGGCTCA
GGGCGCTCCACACCCAGTACTCCATCCACGTTGTCCCCGGCCACGCTGTCCAGGGCGCAG
TCCCTCTCCAGCGAGTCCCCCCTCGCACCCCTAACACCCGTCCTCACCGGCGTCCGTATA
TCACCCGATGGGAATGTATCCAGCGAGGATAAGAGTAAATTAGCTCATCAACAAACATAC
AGACAATACAAAGAAGCCTTAAGACAGCAGCGGCAGCAGGACGTGTACCGCCCCCGCACC
GACCAGCCCTCCCCTGACCTGGACTCCCCACAAACCCAAAGCCCGGTCCACTTCCAGAAA
TCCCCACACTCCCCCATCAACGGATACAGTAACGTATCACCATACAACAGATCTCTATCC
AACAATTCCTCCCCGAACACACCGAATGTTCCAAACAGCCCCAGCTCCCCCGTCCTACAT
TCGACGCCGAGGAGGCTAGCCCAAAACGGCAACACCGACAAAGAAGAAACAAAACGACCT
GTCCAAAAAGTCGTTCCGTCACGTAACGTTAACAAAATGTACACATCCGTCAACGGTAAC
ATAGATTACACGAAACTGAACGGTGATCTGTACACTAAGCCGACATCTCCGACTAAATCA
CCGACAAGTAGTCTAGGGTATAATAGCATTAAATCGAATATACCGAGGCAGAACGGCGAC
GCTAAGCTTTTTACAACCGCGGTGTCGTATTTGAAAGGTGCTGGAAATAAACCGAGCGGG
AAAATAGCTTGGAACAAAGAAACGGCGCCGGAGAAACTCAGCTTCACTATGAAGAGGGAG
TTTGATAAACAGAAGGAGGAAACGGAGTTATTGCAGCAACTTAGAACGATAATAGAGTCC
CGCCTGAAGATGTCTCTCCCCGAGCAGCTGGCTCCGGTGTTGTCGGACGGGGTGGTGTTG
TGTCACCTCGCCAACCACGTGCGTCCGCGGGCCGTCGCCTCGGTTCACGTACCCTCGCCC
GCACAGCCAAAGCTAACAATGGCAAGGTGCAGGCGGAATGTCGACAATTTCTTGGAGGCC
TGTCGAAGAATCGGCGTTGAGGAAGAGGATATCTGCTCGCCAGAGGACATTGGTGATGAA
ACCAGCATACGACCTCTCGCGATCACAGTCCAAGCTCTACTGGCACACGCCACGCGCTCG
CCAAAGGATATCCAACCCAACGACCAATCAACACCGGAACTGGAACTTGTAAGAAATCAG
AGCCCGGAACCAGAAGAGTTTTCGACCAATCACAACCAAGGATTCCACAGCATTGAACTA
GACTACAGACAACATAGATACAGCGAAGACAGGTATATAAGCAACTTCAATTACAACCAG
AACTACACATTCGACGAGTCAGAAGAATTTCAACTCAACTGTGAGAACAATAACGCCGAG
ACTCAGAATGTCTATACGCCCGTTTATAACAATGAGCTGAGAATTAGAGGACCTTATTAT
CAGAAGAATAAGATTCAATTCGTGACGCCGTTCTGTAAAGGTGATGGTGTATTGAAGAGT
GATAATTTCGAAATATACGATACAGATGAAGTGGATTTTCCTATGGATTTGATCAGCGAG
GAAGTGGATTCAGGCAGATATGACAGAGAGAGGATGAACCTCAATATACAAGCCAATTAT
ATAAAACTCATGTGCTGTGCAGCGGATGTTCTTGAGGGTAAAGGGACAGTTCAAGTGGCT
ATAACAGTAACGGAACTTCTTAGACGACACGCCGTCATCAGGGAACAAACCCCCACCCCC
ACACATACACCAACTCTAACCCCAACCCCCACTCCAACTCCTACCCCAACCCCGACCCCC
ACACCCGCCACCTAG
Protein sequence:
MPLQVLLLQDNLLTSLPKEIGKMTSLAELDASNNKITQVPMTLGDCTGLRCLDLSNNQLG
LLPLQITYLRLEHLDVSCNCISSLPLELRNMTTIITLNLDNNPLVSPPTTICMRGRVHIF
KYLENMSNKDTLQHRRVDETRRTAKHTSYISSPNNQITSGNATIDCLRHKPRHVVDSGYC
TDGVEKRWSNDGGCETGGGSGRSTPSTPSTLSPATLSRAQSLSSESPLAPLTPVLTGVRI
SPDGNVSSEDKSKLAHQQTYRQYKEALRQQRQQDVYRPRTDQPSPDLDSPQTQSPVHFQK
SPHSPINGYSNVSPYNRSLSNNSSPNTPNVPNSPSSPVLHSTPRRLAQNGNTDKEETKRP
VQKVVPSRNVNKMYTSVNGNIDYTKLNGDLYTKPTSPTKSPTSSLGYNSIKSNIPRQNGD
AKLFTTAVSYLKGAGNKPSGKIAWNKETAPEKLSFTMKREFDKQKEETELLQQLRTIIES
RLKMSLPEQLAPVLSDGVVLCHLANHVRPRAVASVHVPSPAQPKLTMARCRRNVDNFLEA
CRRIGVEEEDICSPEDIGDETSIRPLAITVQALLAHATRSPKDIQPNDQSTPELELVRNQ
SPEPEEFSTNHNQGFHSIELDYRQHRYSEDRYISNFNYNQNYTFDESEEFQLNCENNNAE
TQNVYTPVYNNELRIRGPYYQKNKIQFVTPFCKGDGVLKSDNFEIYDTDEVDFPMDLISE
EVDSGRYDRERMNLNIQANYIKLMCCAADVLEGKGTVQVAITVTELLRRHAVIREQTPTP
THTPTLTPTPTPTPTPTPTPTPAT