| New model in OGS2.0 | DPOGS208817 |
|---|---|
| Genomic Position | scaffold706:- 51791-58449 |
| See gene structure | |
| CDS Length | 1113 |
| Paired RNAseq reads | 169 |
| Single RNAseq reads | 503 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007923 (1e-26) |
| Best Drosophila hit | buzidau (2e-65) |
| Best Human hit | SET and MYND domain-containing protein 3 isoform 1 (4e-31) |
| Best NR hit (blastp) | PREDICTED: similar to Buzidau CG13761-PB [Tribolium castaneum] (5e-86) |
| Best NR hit (blastx) | PREDICTED: similar to Buzidau CG13761-PB [Tribolium castaneum] (2e-80) |
| GeneOntology terms | GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0005575 cellular_component GO:0008270 zinc ion binding |
| InterPro families | IPR002893 Zinc finger, MYND-type |
| Orthology group | MCL14067 |
Nucleotide sequence:
ATGTATAAGCTTAAACATATAAACGCTGTAAAGACCGGTGATCTTATTCTATCGGAAGAA
CCATTTGCCTATGTTTTATCGTCCAAAGAAAAGGGAAGTCGGTGTGATTTCTGCTTAGAA
AAAGGAAAGGTGTTGAAATGTTCTGGCTGCCAATTTGTCCACTACTGTAATAGAAGTTGT
CAGAAAGATGCCTGGGAAGATCACAAGTGGGAGTGCGCTAATTTAAAGAGGATAGCTCCT
AAAACTATACCTGATGCAGCTCGTCTTCTCGCCAGGATACTGAATCGTCTTCAACGTGGT
AACGGCGGTGCTTACAAGGCTTTTTATACACCGACTTCATTCAGGGTGTGGAAGGATCTC
ATGTCGCATTATTCCGATCTTAAATCTGACAAGAAAAGGATGGATCATTTTTCTACCCTC
AGTATGGTGCTGTTCGAATACTTGAAGGACATCTCATTACCGAACACAGCTGATCTCATG
GGATTGTACGGAAGAATGGTGATAAATAGCTTTACAATATTGGATATTGAGATGAATTCT
ATAGGAACGGGGATCTATCTGGCCTCGTCTGTAATAGATCATAGCTGCAATCCAAATGCT
GTAGCCGTCTTCGATGGAAAGACCATCAACATAAGAGCTTTGAAAGACATGAATTGCTTG
GATTGGAAAAAGATTAGAATATCTTACATCGACCTGATGAAGACGCCTTATGAACGTCAA
ATGGAACTGCGTCAGAGCTACTACTTCCTGTGCCAGTGTGACAGGTGCTTGGACGAAAAC
CGGATAAAATACGTGCACGCGGCTAAATGTCTGAAAGACGGATGTGAACATCCTGTAAAT
ATAAAATGGCGGGAAAATTTAAAATTAGTTGAAAAGATAGAAAAGGAGAAGGCAAAAGAA
AATGGCGCCGGTGATACGATAGTGAGTAATGGATGCAGTGAACCGATATTTAATGGAATT
CTGCCACTGCCGGATGGATCTGTGTACTGTGGGAAATGTGGTACTGAGTTTATGAGGAAT
GATCTCGACAAGTTCATGAGGACGATGGAGGAGAGTGAGGTCAACTTGGAGAATATGAAA
GAGACTTCAGTTGCTTGTATCCTTTGCAAATAA
Protein sequence:
MYKLKHINAVKTGDLILSEEPFAYVLSSKEKGSRCDFCLEKGKVLKCSGCQFVHYCNRSC
QKDAWEDHKWECANLKRIAPKTIPDAARLLARILNRLQRGNGGAYKAFYTPTSFRVWKDL
MSHYSDLKSDKKRMDHFSTLSMVLFEYLKDISLPNTADLMGLYGRMVINSFTILDIEMNS
IGTGIYLASSVIDHSCNPNAVAVFDGKTINIRALKDMNCLDWKKIRISYIDLMKTPYERQ
MELRQSYYFLCQCDRCLDENRIKYVHAAKCLKDGCEHPVNIKWRENLKLVEKIEKEKAKE
NGAGDTIVSNGCSEPIFNGILPLPDGSVYCGKCGTEFMRNDLDKFMRTMEESEVNLENMK
ETSVACILCK