| New model in OGS2.0 | DPOGS208807 |
|---|---|
| Genomic Position | scaffold706:+ 48426-49865 |
| See gene structure | |
| CDS Length | 1440 |
| Paired RNAseq reads | 209 |
| Single RNAseq reads | 495 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007961 (2e-99) |
| Best Drosophila hit | CG1316 (7e-66) |
| Best Human hit | RNA-binding protein 45 (5e-62) |
| Best NR hit (blastp) | PREDICTED: similar to CG1316-PA [Apis mellifera] (1e-101) |
| Best NR hit (blastx) | PREDICTED: similar to CG1316-PA [Apis mellifera] (7e-98) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL12880 |
Nucleotide sequence:
ATGGATAACCGGCGTAAATTCCCCCGAAATGAAGAGAGAGATCGCGAAGATGTGCCGGTA
TATTCAAGACTTTTTATAGTTTGTGATCGCAATTTAAAAGAAGATAATTTTAGAGAAGTT
TTCTCTAAGTTCGGTTATATAGAAGATGTACGTATTCCCAGAGATCATAAATCAGGAGAA
CCTAAAGGCGTGGTATTCATAAAATTTTCTAAAACGTCCGAAGCTGCTCTGGCATTGGAA
GAAATGAATCTTAAAGTAATGCCATATTCTAGCAGACCACTTAAAGTGATGGTGGCGGCT
AATAAGTCAGATATACAATCTGAAGACCACAGTAATGAGAAATATCGTAGATTATTCTTA
CATATTCCCAAAGACATGAATGAAGATATGCTCGAGGAAAATTTCAAAAAATACGGACAT
ATTGATGATGTTCTCATACAGAGAGACAGGAATACGAGAGAACCGAAAGGTTTCGCTTAT
ATAAAATTTCGAAAATTTTCAGAAGCGGCATTTGCATTTGAACAATGTGAGAAAAAATAC
AGAGCTATCTTCGCTCAACCTAAAGGTGCTAACAGACGTCCGGAAACAAGTTACGAGACT
AATATTAATCATTTAGCTATGTCTTCTTCAAATCAGCGGAACTCTATCATGACAATGATG
AATGTACACCCCAGGGGGTACACCCGTGTTAATTTCATGTGCAGTCCATACCTCACACAA
ATGCATGTAGAATCGTTATTTGATATTGTGCCTGGGCTTGTAGATTTTCGTTACTTTGTC
GACTTGGTAAGGAATTTTAGTAAAGGTTCAGCCCAGTATTCAAATCCGGTGTCAGCTGCG
TACGCTGTTGAGAAGTTAAATGAATTTGAATACCCTCCTGGTCAAAAAATATTCGTTAAG
CCAGCTGATACAAACTTTGACAGCCATCCACGTAACCAGGAACAATCATTCTCCGATATA
CCGAACGCGGTCAGTAATTTGAGAAACGCTATCGCTTCAACTGCAAATTCCACCTCACCT
GATCTGGTGCAACTCGCTGAGGCTATAGCTGAAGCGTCAAAATTAATAAAAATGGCCACA
GCCGGAGTCTCAGATGACAATATTCCCGACAGCAATGATTTGAATTATTGTAGCGTTAAA
TTACCACCCACCCAACCGTTAGCTGATATCGACAGTCCAGTAGCTAAGAGGTGCTTTCTG
GTCTGCAAACCTCAGCCACCTCCGCTCACGGTGCTGCGGGATATATTCTGTCGTTTCGGT
AATCTCATCAACGTATACACACTACCGCAGAAAACTGTAGGATATGCTCGTTACTCGAAA
GCCGAGTCAGCCGATAACGCAATACAAACGTTACACGGCGCCGAAATCTGCGGCATCCGT
ATGAAAGTTCTAGAAGCGGAGGACGAAGCGCCCTCCAAAAGAATGAGATATGATCATTAA
Protein sequence:
MDNRRKFPRNEERDREDVPVYSRLFIVCDRNLKEDNFREVFSKFGYIEDVRIPRDHKSGE
PKGVVFIKFSKTSEAALALEEMNLKVMPYSSRPLKVMVAANKSDIQSEDHSNEKYRRLFL
HIPKDMNEDMLEENFKKYGHIDDVLIQRDRNTREPKGFAYIKFRKFSEAAFAFEQCEKKY
RAIFAQPKGANRRPETSYETNINHLAMSSSNQRNSIMTMMNVHPRGYTRVNFMCSPYLTQ
MHVESLFDIVPGLVDFRYFVDLVRNFSKGSAQYSNPVSAAYAVEKLNEFEYPPGQKIFVK
PADTNFDSHPRNQEQSFSDIPNAVSNLRNAIASTANSTSPDLVQLAEAIAEASKLIKMAT
AGVSDDNIPDSNDLNYCSVKLPPTQPLADIDSPVAKRCFLVCKPQPPPLTVLRDIFCRFG
NLINVYTLPQKTVGYARYSKAESADNAIQTLHGAEICGIRMKVLEAEDEAPSKRMRYDH