| New model in OGS2.0 | DPOGS212084 |
|---|---|
| Genomic Position | scaffold3816:- 4399-11758 |
| See gene structure | |
| CDS Length | 2793 |
| Paired RNAseq reads | 134 |
| Single RNAseq reads | 389 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006716 (1e-48) |
| Best Drosophila hit | alphaPS5 (5e-20) |
| Best Human hit | integrin alpha-4 precursor (3e-18) |
| Best NR hit (blastp) | hemocyte-specific integrin alpha subunit 1 [Manduca sexta] (6e-115) |
| Best NR hit (blastx) | hemocyte-specific integrin alpha subunit 1 [Manduca sexta] (4e-102) |
| GeneOntology terms | GO:0016020 membrane GO:0016021 integral to membrane GO:0004872 receptor activity GO:0007155 cell adhesion GO:0007229 integrin-mediated signaling pathway GO:0008305 integrin complex |
| InterPro families | IPR013517 FG-GAP IPR013519 Integrin alpha beta-propellor IPR000413 Integrin alpha chain |
| Orthology group | MCL19909 |
Nucleotide sequence:
ATGATTTTCGGTATATTTAATTTGGTCGTTCTAAATATAATAACAGTATGTCAAGGCTAC
ATCCATCTCGCCTCCATGAAGATTTACCGACACGATACAAACAAAACTAATTCTTTGTTT
GGCTACAGCCTAGCTTACCAATCAGGGATTCGAAGATTGATTATCTCGTCACCACTTGAA
AACGAGAATGGACAAGTTTTTACAATGTCCTTGAATTCTTCAAAAATTGAAACTGTTTCC
CTGGACCCAAAACTTCTACCACGAACGCCAACTATCAAACATAACTTCTGGCTCGGTGCT
ACAGTGAAGGCTAATTCAAATTTCTTTGTTACATGCGCCCCACGATACGCAGAACTGAAG
ACAATCCGAAAGCCAATTCGTACACAATACCCAGCCACACTAGGGCTCTGTGTCTTATTT
GAATATACGGATTCGGATACATATATATCTAGAAGACTCGCACACATGAGTAGTGAAGAC
CGATCCATAAGAGCAAAAACATTTGGAGAAAATCTAGACTCCATGGGTTGGAGTATAGAC
CTAGCAAACTCTGGTCAAGTCCTAATAGGATCGCCGGCGATGTTGACAGGTCGTGTGGTG
TTATATGAAGATCCTTACAGCAAAGACTTCCCTAAACTCATATATAAAATGAACCAAGAA
AACATAGCTCGACATAATTACGGTTACAGCTTAGCTATAGGAGAGTTTTTTGATCAGAGC
ACAGTCTACGCAGTCAGTGCTACGTTTGGATTTGGAAAGGTTTATTTTTTTGACTCGAAG
CTTCAAAATATAGGTATTATAAAAGATATAGAAATTGGTTCGATTTTCGGCGCAGCTCTA
TGTCCAGCCCATCTAGGAACGAAAGCCTTGTTGGTAGGAGCTCCAGCGTATTTCGACAAA
ACTTACAATTACGATGTGGGAGCCGTCTACGTTTATTTGGATCAAACAGAAGAAGGTTGG
AAGAAAATGCTCCTAAAACGAAAAATCAAAGGTTTATCTAGTGGAAGCTACTTTGGTCAC
GCTATTGCTAGTCTTGGTGATATAGATGGGGATAATAAAGATGAGATTGTCGTAGCAGCA
CCCTTTGAAGACGGAATCGGTGCAGTGTATTTCTTCTCTGGTTCTGGTGTTCTGGATGGA
TTATCTCAACCGAGAAAAATTCAACCCAAGGGTTTCCAATCCTTTGGATTCAGCCTAACA
ATATTGGAAGACTTGGACGGGAACGGTTGTAAAGAACTAGCTGTTGGATCTCCCAAAGAT
AACAAAGTGGTTATTTTTAAAACTATCGCTTTTATTAAAGTAATACTGAAAGCAGACTTA
AATCAAGAGAGCGACAAAGAATTTGTATTAACGTCATGTATCGATGGAGTCTATCCTCTG
AAGCCAGAAAATATAACTGCAGATATAGTAATTGAAGTGAAATTAAAAAACGCAGCGTTC
ACAACGGTCACCTCAAAAAATGGTGTGTATCAATACGAGGTTTCCATGGCCGAAAAGAGG
AGGCTGTGTAAAAACTTCACACTCGAAGTGCATGAGGATGCTGAAAAAGGTTTCGATTAC
GAAATTATGTCATACGAAGTAACTGCATCTTTAAAAGAACATCCAGAAGAAGCGCTTGAG
TTTGACCCATCAAGAGTCCTCTTGAGTGATGAAAGTGTTTTAAAACAACAAGGACAGAAG
TGGAAAGACGATACATCGTTACAAGAACCGCAACTTCACCTCAACATATCTACTTCAATG
GCACAACCGTACATGATTGGTTCTTCGTACCAAGAAACGTTTATATTGTCAGTATTAAAC
GAGGGTGGTGCAGCACAGGCGGCCTGTATGCATCTGGTAGTGGAAGGAGCGCGAGTCATC
GCACATCCATCTTCGTGTAGACGCGAGCTGGACAGTTTAGTCTGCAGACACAACCATGTC
ATCAACACCAATGACTTTTGGATAAATGAAATTCTAATAGAAACAGATTATTTGACAAGT
ATTCATGACACTCTTACGGTCCGTTGTGATTTATATCCACAATGTGGCGGTAAAAATGTA
TCAAGTTACGAAAAAATTATTGAATTAAAACCTTACAACTATATGGTCGTTATTACGGGC
CAATCCAATCCTGATGAAAAGTTACCAATCACTGTTGATGATCTCCATACGGGCAAATCA
TTTGATCATGTGTATACGATATACAACTTCGGTCTCACCAACTGGGTAGGAGTGCAAAGT
GAGATCGTTTTACAAAATTCCCAATTCATCGACTACTCAGATGCACCAATAAAGGTTTAT
GCATACACATCTTTAATCGAATGTGAAATTGGCAATAAAAACCGATCTGAAGAAAAAATA
AGAGTGTTATGCAAAATAGGTGACTTGGGAAGACAAGAAAAAGTTGTTGTCGTTGTTGCC
ATGAATATTGCAAGAGATACTTTAAAATTCGACAGTGAAGATCAGAATATCACAGTCACC
TCGTCTATGGAATTGCTGCTTCGGGACGGAAACAAATTTTTAATCTTGAATACAACACTG
ACTTTCGAAGCGGCCACAGTTCCTCTTTGGGTGACTCTCGCATCCTCCTTCCTAGGCGTC
TTTCTTCTCATTATAATTGCATATATTTTATATGAATATGGATTTCTTCAACGAAAGACA
AAGGAAAAACTAAATGAAACTAAAAAGGAGGTGTACAGACAGAGCGTGCGCCGTTCTATG
ATGCGAGAGAGCATGAGAGCGGCTATCAACAGAAGGAGTGCAGAGGACAACGATATATTG
ATGGAGGAAGTCGTCCATGAATCAGATTTTTAA
Protein sequence:
MIFGIFNLVVLNIITVCQGYIHLASMKIYRHDTNKTNSLFGYSLAYQSGIRRLIISSPLE
NENGQVFTMSLNSSKIETVSLDPKLLPRTPTIKHNFWLGATVKANSNFFVTCAPRYAELK
TIRKPIRTQYPATLGLCVLFEYTDSDTYISRRLAHMSSEDRSIRAKTFGENLDSMGWSID
LANSGQVLIGSPAMLTGRVVLYEDPYSKDFPKLIYKMNQENIARHNYGYSLAIGEFFDQS
TVYAVSATFGFGKVYFFDSKLQNIGIIKDIEIGSIFGAALCPAHLGTKALLVGAPAYFDK
TYNYDVGAVYVYLDQTEEGWKKMLLKRKIKGLSSGSYFGHAIASLGDIDGDNKDEIVVAA
PFEDGIGAVYFFSGSGVLDGLSQPRKIQPKGFQSFGFSLTILEDLDGNGCKELAVGSPKD
NKVVIFKTIAFIKVILKADLNQESDKEFVLTSCIDGVYPLKPENITADIVIEVKLKNAAF
TTVTSKNGVYQYEVSMAEKRRLCKNFTLEVHEDAEKGFDYEIMSYEVTASLKEHPEEALE
FDPSRVLLSDESVLKQQGQKWKDDTSLQEPQLHLNISTSMAQPYMIGSSYQETFILSVLN
EGGAAQAACMHLVVEGARVIAHPSSCRRELDSLVCRHNHVINTNDFWINEILIETDYLTS
IHDTLTVRCDLYPQCGGKNVSSYEKIIELKPYNYMVVITGQSNPDEKLPITVDDLHTGKS
FDHVYTIYNFGLTNWVGVQSEIVLQNSQFIDYSDAPIKVYAYTSLIECEIGNKNRSEEKI
RVLCKIGDLGRQEKVVVVVAMNIARDTLKFDSEDQNITVTSSMELLLRDGNKFLILNTTL
TFEAATVPLWVTLASSFLGVFLLIIIAYILYEYGFLQRKTKEKLNETKKEVYRQSVRRSM
MRESMRAAINRRSAEDNDILMEEVVHESDF