| New model in OGS2.0 | DPOGS204613 |
|---|---|
| Genomic Position | scaffold5035:+ 134-6159 |
| See gene structure | |
| CDS Length | 2106 |
| Paired RNAseq reads | 6621 |
| Single RNAseq reads | 18454 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012171 (5e-06) |
| Best Drosophila hit | karst, isoform E (4e-66) |
| Best Human hit | T-complex protein 1 subunit eta isoform a (8e-26) |
| Best NR hit (blastp) | PREDICTED: similar to beta chain spectrin [Nasonia vitripennis] (1e-126) |
| Best NR hit (blastx) | PREDICTED: similar to beta chain spectrin [Nasonia vitripennis] (1e-95) |
| GeneOntology terms | GO:0030707 ovarian follicle cell development GO:0007009 plasma membrane organization GO:0003779 actin binding GO:0008017 microtubule binding GO:0008092 cytoskeletal protein binding GO:0008091 spectrin GO:0016327 apicolateral plasma membrane GO:0045186 zonula adherens assembly GO:0000910 cytokinesis GO:0006897 endocytosis GO:0016324 apical plasma membrane |
| InterPro families | IPR002017 Spectrin repeat IPR002423 Chaperonin Cpn60/TCP-1 IPR001849 Pleckstrin homology domain IPR018159 Spectrin/alpha-actinin IPR001605 Spectrin/pleckstrin-like IPR011993 Pleckstrin homology-type |
| Orthology group | MCL10080 |
Nucleotide sequence:
ATGTGGGCCGTTGTGCAGAGGCCGGGTCTCGGTGAAGCCTTCCCCGACGCCAAGGAGCAC
GTGCTGTCTAAGCTGGAGGAGGTGACTGAAGCGCTGGAAGCGCTGGAGGAGAAGGCAGCC
CACAGCGAACACCAGCTGGAACTGGCTGATCAGCTTAAAGCGTACTTCGACAAATACCAG
GAGCTTATGGCTTGGAACAACGAGACCCTCGCCCGCGTGACCGCTCCCGAGCTGTCTTCT
GATGTGGCGGGCGCTGCACGACTGCTGGCCAGACACCAGGACCTCGCCGCTGAGATACAC
GCCAAGGATGAGAGCTTCCAGACCTTCTATGACGACGGTGAGAAGTTGGTCCGCGAGGGT
CACTTTATGTCCCAGGAGGTGGAGACGAGGATGTCGTCTCTGAGGGCTCGTAGGGCTGCG
CTGGACCACGCCTGGAGCGCCCGGAACAGGATATACGAGCACCACCTGGACGCCCTCATG
TTCTTAAGGGACGCTGATGCGCTGGACCGCTGGATATCTTCCAGAGTGCCTCTCGTCCGT
GATGGAAAATATGGTGAAAGCCTGGCGCAGACGGAAGAGCTGATCAACAGGCACCGAGAC
TTGGAGGAGACCATCGACGCGCAGAAGGAGAAGTTCCTCGCACTCAAACGGATCACGCTG
ATCGAGAAAGCCTTTAAAGATCAGAAGAATGAAGAGGAGGCTGCCCGCAAGCAACACCTG
GAGAGACAAGAGGCTGAGAGGATGCAGCTGGTGCGGAAGAGAGAAATGGAGAGGATCGCG
GAGGAGCGGCGGAGGGAGACAGAGGAGCAGAGAGGAACTGCTGTACAGGTGGAGCGTCAG
TTATCCAGCTCCGGTATGAACAGCAGCCTGGCTGGCTCCGTGGAGGAGACCCTCAGCCCC
GCGCCGCAGTTTGACCGCCTCCCGAAACCGGATGTTCACGTCAAGAGAGCTGAGAGCATG
AGCGTGGTGAAGACTCCTAAACGGACACCGTCGTTCACGACGCGCAGGCGGACCCAGAGC
TTCAGGCGGCACAGAAAACACGATGACCTGCCTCCGGTCGAAATAGAAGGATACTTGGAG
CGCAAGCAGGAGGCGGGTTCGGGCGGCGTGAGAGCGGCCGTGAGGAGTTGGAGGTCGTAC
TACGCCGTGCTGTGCGGTCAACTGCTCTGCTTCTTCAGGGACCAGGAGGATTTCGCCAGC
TCCAAGGCCGCGGCGCCACCTGTCGCTATACTCAATGCTCGTTGCACGCCCGCCAGCGAC
TACACCAAGCGGTCGCACGTGTTCCGTCTGTCGTGCGCTGATGGGGCGGAGTACCTCTTC
TCCTGCGGGTCCAGGGACCTGCTAGCGGAGTGGGTCGCCAAGCTAGCCTTCCACGCAGCG
CTGCCGCCCCAGCTGCAACTGACGCCCTACAACGCCGAGGAGTCACCTACAGCGGACGTG
AGGAGGAGATTGCAGCAGAACGCCTCCTCGTCATCCTCGGCCGCTTCCTCACCGGAACCC
CAGCGTCACAGGACCCAGGCCGAGATACTGCAGGAACATCGCACCAGCCAGAAGGAGAGT
CAGGCCGGTAGAGAAGATAACAAGAGTCGAGTCTCCGCAGACAGGCATATTGAGTCTACA
GTGCTGCCCTCTCTGCCGCCGAGACAGCCGCCGGCAGTGGACGATACTGCAGATGTGGTG
CTCAGGAACTCGGACCGCGAGTCCCACTCCTGGGGCCGCTCCAGGTTCTCCAACGGCAGA
GACCTCAACGCCGAGTTCATACGGTCACAGAGAGACGGTAATGACATTGACACCCACCAT
CACACAACATGGAGTGGCGGGTCACCGCCACATAACGCCGGCTTCGACGCCACCAACCTG
CTGAACAAGCTGCGGCAGAAGCATCATCAGGGTGAACCGTGGTATGGTGTGGACATCCAG
AAGGAAGACATAGCTGACAACTTCGAAGCCTGCGTCTGGGAACCAGCTGTAGTGAAGATC
AACGCTATAACAGCTGCCTGTGAAGCGGCGGCCCAGATCCTGTCCATCGATGAGACCATC
AAGAATGCGAAGAGTGGTGAACCCCAAATGCCGGGGCGGGGTATGGGACGGCCGAGGATG
GGTTGA
Protein sequence:
MWAVVQRPGLGEAFPDAKEHVLSKLEEVTEALEALEEKAAHSEHQLELADQLKAYFDKYQ
ELMAWNNETLARVTAPELSSDVAGAARLLARHQDLAAEIHAKDESFQTFYDDGEKLVREG
HFMSQEVETRMSSLRARRAALDHAWSARNRIYEHHLDALMFLRDADALDRWISSRVPLVR
DGKYGESLAQTEELINRHRDLEETIDAQKEKFLALKRITLIEKAFKDQKNEEEAARKQHL
ERQEAERMQLVRKREMERIAEERRRETEEQRGTAVQVERQLSSSGMNSSLAGSVEETLSP
APQFDRLPKPDVHVKRAESMSVVKTPKRTPSFTTRRRTQSFRRHRKHDDLPPVEIEGYLE
RKQEAGSGGVRAAVRSWRSYYAVLCGQLLCFFRDQEDFASSKAAAPPVAILNARCTPASD
YTKRSHVFRLSCADGAEYLFSCGSRDLLAEWVAKLAFHAALPPQLQLTPYNAEESPTADV
RRRLQQNASSSSSAASSPEPQRHRTQAEILQEHRTSQKESQAGREDNKSRVSADRHIEST
VLPSLPPRQPPAVDDTADVVLRNSDRESHSWGRSRFSNGRDLNAEFIRSQRDGNDIDTHH
HTTWSGGSPPHNAGFDATNLLNKLRQKHHQGEPWYGVDIQKEDIADNFEACVWEPAVVKI
NAITAACEAAAQILSIDETIKNAKSGEPQMPGRGMGRPRMG