| New model in OGS2.0 | DPOGS202802 |
|---|---|
| Genomic Position | scaffold1241:+ 17245-26597 |
| See gene structure | |
| CDS Length | 1932 |
| Paired RNAseq reads | 3506 |
| Single RNAseq reads | 8361 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010449 (0.0) |
| Best Drosophila hit | CG11490 (7e-119) |
| Best Human hit | TBC1 domain family member 15 isoform 3 (1e-112) |
| Best NR hit (blastp) | PREDICTED: similar to CG11490 CG11490-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG11490 CG11490-PA [Tribolium castaneum] (2e-175) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity GO:0005097 Rab GTPase activator activity |
| InterPro families | IPR000195 Rab-GAP/TBC domain IPR021935 Protein of unknown function DUF3548 |
| Orthology group | MCL13632 |
Nucleotide sequence:
ATGTCGTGCAGTTCGGTGGAAGATTTACCAGAACAGTGTAAAGATCTATTCACACAAGAT
GGAGTCCTGCTCAAAGCATCACTCGGTCGTCCGATCAGTGACCTCAATTCCATCGGCATG
TTATGCATTGTACAGAACATGGACGGCTCTAAGTGTATCGAGTGGCGTCCCAACGACCTC
ATAACCATCGATTCCGATACACAGGACCAAGAGTGGGCTGTGGTTAACACGATAGGTCGC
CGACAGAGGACGCTAAGCGGCAACATGACATCCGACTACGAAGCAGCTCGCGCCCGCATC
ATCAGGATACCTCTGGACGAGCTGAAATCATTCAAAGTATCTAGGAACAATCAGCAGATG
CAGTTTTCTACTAAACAGGGCGTCTGGCAAAACACTTGCTACTTCCAACACGGGAATGCC
GAGATATTCCTGTCATATCTCAAGAACCACGTCAAAACCGCAAAAACCAGGCACGACAGG
AACACGTACGTGGTCGTGGAGCCTAACGCAGAGTGTCAGGTGCTGAACAAGTCGTTCGCG
GAACTGGACATATTCACGGAGAACACTACGGATGTGGTCTGGAACCTGGTGTCCAACTTC
AAGCAGAGGCCCTACGAGACTACGATGGAAGCCTTCTCCAAACTCACCGATATTGTATAC
TACGGTGAGGGAGTTAACGGTAAGCGTGAAATGTCAGATGAGGTGGCGGATCTCCTCACG
AAGAGTATGAGCGCTTTAGAGGACACGACCAGCATCACCAGGAGTGAAGAGTACGAGGTC
ATTAACGTGAAGCCCACGCTACCGCCGCGGCCTTCAATACCTAGGGGCACACCTTTATCA
ACTGAGAAATGGGACGGTCTGCAGGACCCAGAAGGAAGGATCACGGAAGTGGAGGGCGTA
AAACAATTAATATTCAGAGGGGGCGTGGCGCATTCAATACGTCACTCAGTATGGAAATAT
CTCCTGGATTATTATCCCTGGAAAATGACTAAGACAGAGCTGAAGAGTTTACACAAGAAG
AGAACGGAAGAATACTTCTCAATGAAGCTGCAGTGGAGGTCAATGACCGAGGGCCAGGAA
TTAAGGTTCTCCGAATACAGGGATAGGAAGAGTTTAGTAGAAAAGGATGTGAATAGGACA
GATAGGACGCATCCCTTCTTTGCTGGTGACAATAATCCTAACCTGATAGTACTCCAAGAC
ATTCTGATGACATATGTCATGTATAACTTCGATCTGGGCTATGTACAAGGAATGAGTGAT
ATTTTAGCGCCTCTGCTGTTGCTTTTGGGCAATGAGGTGGACAGCTTCTGGTGCTTCGTG
GGTTTTATGGAGAAAATTTCATCAAACTTTGATATGGACCAGGCCGGCATGAAACAGCAG
TTGTTGAATCTGCAGCAGCTAATGGCTTTCATAACTCCGGATTTAGCCAAACACCTGGCC
AGCAAAGACTCCGGGAACATGTACTTCTGCTTCAGATGGCTCCTGGTGTGGTTCAAGAGG
GAATTCTCTCATAGAGATATCATGAGGTTATGGGAGGTACTGTGGACGGGGTTGCCATGC
GCCAACTTCCATTTGCTGATATGTGTTGCCATTCTTGACGCTGAAAAGGATGTTCTTATT
AGCAAGGATTACGGATTTACTGAGGTCTTGAAGCATGTCAACGACCTGTCAATGTGCCTC
GATGTGGATATCATACTAAGCACAGCGGAGGGTATTTACCATCAGATAGTCTCGTCCCCA
CATCTATCAGATCAGATCAGGCTGATTTTAGGCCTTCCATTGGCCCCGAAACCTGAAGTA
CCAGAACCCGAGCCCACTACATTCAGCAATGGTAATGACAGAGGAGAAACTGAGGAACTT
AGAATATTTTTTGTATTAAATATGTATGTGTCCTTCGAATGCTGTACTAATGTTGCCATT
TTAAATTATTAA
Protein sequence:
MSCSSVEDLPEQCKDLFTQDGVLLKASLGRPISDLNSIGMLCIVQNMDGSKCIEWRPNDL
ITIDSDTQDQEWAVVNTIGRRQRTLSGNMTSDYEAARARIIRIPLDELKSFKVSRNNQQM
QFSTKQGVWQNTCYFQHGNAEIFLSYLKNHVKTAKTRHDRNTYVVVEPNAECQVLNKSFA
ELDIFTENTTDVVWNLVSNFKQRPYETTMEAFSKLTDIVYYGEGVNGKREMSDEVADLLT
KSMSALEDTTSITRSEEYEVINVKPTLPPRPSIPRGTPLSTEKWDGLQDPEGRITEVEGV
KQLIFRGGVAHSIRHSVWKYLLDYYPWKMTKTELKSLHKKRTEEYFSMKLQWRSMTEGQE
LRFSEYRDRKSLVEKDVNRTDRTHPFFAGDNNPNLIVLQDILMTYVMYNFDLGYVQGMSD
ILAPLLLLLGNEVDSFWCFVGFMEKISSNFDMDQAGMKQQLLNLQQLMAFITPDLAKHLA
SKDSGNMYFCFRWLLVWFKREFSHRDIMRLWEVLWTGLPCANFHLLICVAILDAEKDVLI
SKDYGFTEVLKHVNDLSMCLDVDIILSTAEGIYHQIVSSPHLSDQIRLILGLPLAPKPEV
PEPEPTTFSNGNDRGETEELRIFFVLNMYVSFECCTNVAILNY