Genomic Position | scaffold776:- 9388-26559 |
---|---|
See gene structure | |
CDS Length | 786 |
Paired RNAseq reads   | 2681 |
Single RNAseq reads   | 6849 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002685 (2e-58) |
Best Drosophila hit   | squid, isoform A (6e-12) |
Best Human hit | RNA-binding protein 38 isoform a (1e-40) |
Best NR hit (blastp)   | RNA binding region containing protein 1 [Bombyx mori] (2e-82) |
Best NR hit (blastx)   | RNA binding region containing protein 1 [Bombyx mori] (5e-66) |
GeneOntology terms    | GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
InterPro families    | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
Orthology group | MCL15007 |
Nucleotide sequence:
ATGTTGATGGCGGGCGCTCTGCCGGCCGAGTCCGATGGACTGCTGGCATTGGGTTCGCTC
CCCGGCCAGAAAGACACCACCTGGACGAAACTGTTCGTCGGCGGCCTCCCATATCACACC
ACGGATAAGAGCCTAAGGGAACATTTCGCTGTTTACGGGGACATCGAGGAGGCTGTTGTC
ATTACAGACAGACAAACCAGCAAAAGCAGAGGATATGGTTTTGTAATAATGGGCGATCGG
GCAGCTGCTGAACGCGCCTGCAAGGATCCCAACCCTATTATCGACGGCAGGAAAGCAAAC
GTCAACTTAGCAATCCTTGGAGCAAAGCCCAGAGGAAATTTGGCGCCAGGCTTCGGACTC
GCAGCGGCCGCAGCGGCCGGCGTCCGTGCAGGATATCCTACAGTACTGCCCGCACATTAT
GGGTTGTCCCCGGGGTACGTGTACGGTGCCCCCGGATATGTGGGGGCCATGAGCGGGGTG
GGCGCCAGCGTGGGTACTGGAGGGGGACTGGTACAGTTGCCGCAACTACAACACGCTGCG
GCCGTGGCTGCTGCGAACCACCTTTATGAATACCAGGCAGCTGCCGCTCAAGGAGCAGCT
GCATACCAGCAGCAATACGCTGCTGCTGGATTCGATCCGTATGCAACTGCTGCAGCAGCA
GCAGCAGCAGCCAGCGGTGCAGGCTACATGTCTCCATACTACACTCTTCAAGGCGGCGGT
GTGCAGGCGCCATTATTGCCACCATTGCCATATCCACCACAGCTCCAAGAAGCACGAATG
CAATAA
Protein sequence:
MLMAGALPAESDGLLALGSLPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVV
ITDRQTSKSRGYGFVIMGDRAAAERACKDPNPIIDGRKANVNLAILGAKPRGNLAPGFGL
AAAAAAGVRAGYPTVLPAHYGLSPGYVYGAPGYVGAMSGVGASVGTGGGLVQLPQLQHAA
AVAAANHLYEYQAAAAQGAAAYQQQYAAAGFDPYATAAAAAAAASGAGYMSPYYTLQGGG
VQAPLLPPLPYPPQLQEARMQ