| Genomic Position | scaffold776:- 9388-26559 |
|---|---|
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 2681 |
| Single RNAseq reads | 6849 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002685 (2e-58) |
| Best Drosophila hit | squid, isoform A (6e-12) |
| Best Human hit | RNA-binding protein 38 isoform a (1e-40) |
| Best NR hit (blastp) | RNA binding region containing protein 1 [Bombyx mori] (2e-82) |
| Best NR hit (blastx) | RNA binding region containing protein 1 [Bombyx mori] (5e-66) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL15007 |
Nucleotide sequence:
ATGTTGATGGCGGGCGCTCTGCCGGCCGAGTCCGATGGACTGCTGGCATTGGGTTCGCTC
CCCGGCCAGAAAGACACCACCTGGACGAAACTGTTCGTCGGCGGCCTCCCATATCACACC
ACGGATAAGAGCCTAAGGGAACATTTCGCTGTTTACGGGGACATCGAGGAGGCTGTTGTC
ATTACAGACAGACAAACCAGCAAAAGCAGAGGATATGGTTTTGTAATAATGGGCGATCGG
GCAGCTGCTGAACGCGCCTGCAAGGATCCCAACCCTATTATCGACGGCAGGAAAGCAAAC
GTCAACTTAGCAATCCTTGGAGCAAAGCCCAGAGGAAATTTGGCGCCAGGCTTCGGACTC
GCAGCGGCCGCAGCGGCCGGCGTCCGTGCAGGATATCCTACAGTACTGCCCGCACATTAT
GGGTTGTCCCCGGGGTACGTGTACGGTGCCCCCGGATATGTGGGGGCCATGAGCGGGGTG
GGCGCCAGCGTGGGTACTGGAGGGGGACTGGTACAGTTGCCGCAACTACAACACGCTGCG
GCCGTGGCTGCTGCGAACCACCTTTATGAATACCAGGCAGCTGCCGCTCAAGGAGCAGCT
GCATACCAGCAGCAATACGCTGCTGCTGGATTCGATCCGTATGCAACTGCTGCAGCAGCA
GCAGCAGCAGCCAGCGGTGCAGGCTACATGTCTCCATACTACACTCTTCAAGGCGGCGGT
GTGCAGGCGCCATTATTGCCACCATTGCCATATCCACCACAGCTCCAAGAAGCACGAATG
CAATAA
Protein sequence:
MLMAGALPAESDGLLALGSLPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVV
ITDRQTSKSRGYGFVIMGDRAAAERACKDPNPIIDGRKANVNLAILGAKPRGNLAPGFGL
AAAAAAGVRAGYPTVLPAHYGLSPGYVYGAPGYVGAMSGVGASVGTGGGLVQLPQLQHAA
AVAAANHLYEYQAAAAQGAAAYQQQYAAAGFDPYATAAAAAAAASGAGYMSPYYTLQGGG
VQAPLLPPLPYPPQLQEARMQ