| New model in OGS2.0 | DPOGS201509 |
|---|---|
| Genomic Position | scaffold776:- 583-3659 |
| See gene structure | |
| CDS Length | 861 |
| Paired RNAseq reads | 249 |
| Single RNAseq reads | 667 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002687 (4e-24) |
| Best Drosophila hit | mediator complex subunit 30 (1e-18) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 30 (4e-19) |
| Best NR hit (blastp) | PREDICTED: similar to mediator complex, subunit, putative [Tribolium castaneum] (3e-52) |
| Best NR hit (blastx) | PREDICTED: similar to mediator complex, subunit, putative [Tribolium castaneum] (1e-46) |
| GeneOntology terms | GO:0005634 nucleus GO:0006350 transcription GO:0045449 regulation of transcription |
| InterPro families | IPR021019 Mediator complex, subunit Med30, metazoa |
| Orthology group | MCL14612 |
Nucleotide sequence:
ATGGCTGGTCAAGGGCATCAGTTTCCTGGAAATTTCCAGGGCAATGCTGGAGCTATGAGG
ACAGGTTTCGGCGGAGGACCCATGGGCAACCAAATGCAGGCTATGCCCAACCAATTAACT
GGTGTGATGGGTGGGCCAATGGGTAATGCAGGTATGGTTGGTATGGGTAATCAGATGGTC
CCGCCCTATGGAGCAGCAATGCCAGGACAGATGGGAAATATGAGTATGGGGAATCAAGGT
ATGGGGGTTGGAGTAGGCACTGGCCCAGCAGGTCTTGGACCTCAAGCGGTACAACAAGCA
GGTATGCAAGTAGCCGCCGTACAAGCTGCTGCACCTCCTCCTGCTCCGGTGAATCACCCT
CCACAGAACAAAGAGTTCAATACAGCCTCCTTATGCAAATTCGGTCAAGAAACTGTTCAA
GATATAGTAAGCAGGACACAAGATGTGTTCCAAACTCTGAAAGCTATACAACCACCTAAC
GGAACACAACACGGTGAGAATGCTAGCAATGATAAGAAAGCAAAGATGCAGGAACAATTG
AGGACGATTAGGCTTCTGTTCAAACGGCTGAGGCTCATATATGAAAAGTGTAACGAGACA
TGTCAGGGTATGGAGTACACACACATGGAGAGTTTAATACCACTGAAAGATGAAGCAGAA
AATAAGGCTTTGGATGAGAGACGGAACACTGAGACCTATAGACAAGTGTTGGAAGAAAAC
AAGGAACTCACTGAGCAGGTAATATATAATTATACCTTATCATTTAGGGTTGCCTCTCAC
ATGAAAAACATACTAATTAATTTATTTATTGCTTATATTAATATCATAAACGAAATTTCA
TTTTTTTTTATTACAGCCTAA
Protein sequence:
MAGQGHQFPGNFQGNAGAMRTGFGGGPMGNQMQAMPNQLTGVMGGPMGNAGMVGMGNQMV
PPYGAAMPGQMGNMSMGNQGMGVGVGTGPAGLGPQAVQQAGMQVAAVQAAAPPPAPVNHP
PQNKEFNTASLCKFGQETVQDIVSRTQDVFQTLKAIQPPNGTQHGENASNDKKAKMQEQL
RTIRLLFKRLRLIYEKCNETCQGMEYTHMESLIPLKDEAENKALDERRNTETYRQVLEEN
KELTEQVIYNYTLSFRVASHMKNILINLFIAYINIINEISFFFITA