| New model in OGS2.0 | DPOGS209334 |
|---|---|
| Genomic Position | scaffold469:+ 35601-44417 |
| See gene structure | |
| CDS Length | 1008 |
| Paired RNAseq reads | 4414 |
| Single RNAseq reads | 47470 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001031 (2e-43) |
| Best Drosophila hit | wings up A, isoform F (4e-39) |
| Best Human hit | ND |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008240 [Tribolium castaneum] (3e-57) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC008240 [Tribolium castaneum] (3e-60) |
| GeneOntology terms | GO:0046716 muscle cell homeostasis GO:0007399 nervous system development GO:0007517 muscle organ development GO:0007519 skeletal muscle tissue development GO:0005861 troponin complex GO:0005523 tropomyosin binding GO:0003779 actin binding GO:0045214 sarcomere organization GO:0030239 myofibril assembly GO:0048738 cardiac muscle tissue development GO:0007507 heart development GO:0000280 nuclear division GO:0005634 nucleus |
| InterPro families | IPR001978 Troponin |
| Orthology group | MCL13965 |
Nucleotide sequence:
ATGGCGGATGACGAAAAAAAGCGTCTCGAGGAGGCGAAGAAGGCCAAACAGGCCGAGATC
GACCGCAAGCGCGCTGAGGTGCGCAAGCGCATGGAGGAAGCCTCCAAGGCCAAGAAGGCA
AAGAAAGGTTTCATGACTCCTGAGAGAAAGAAGAAACTTAGGTTGCTCCTGCGTAAAAAA
GCAGCTGAGGAATTGAAGAAAGAACAGGAACGCAAAGCCGCTGAGAGGAGGCGTATCATT
GAGGAGAGGTGCGGTAAACCCAAGAACGTTGACGATGCTAACGAAGATGCTCTTTCGAGG
GTTTGCAAAGAATATCACACCCGCATCGGCAAGCTTGAAGATGAAAAGTTTGATCTGGAA
TACATCGTTAAAAGAAAAGATATGGAGCGGCTCTCACGAGCATCATTACCGGTTATCATC
AGCGTATCGCGAAACTCGAAGAGGAGAAGTACGATCACGAGATGGAAGTTGCCCGCAGAG
CATTTGAGGTCTGATCTGCTTTGGACAATAGGCAATTTATGCTACGCTCTGCGTTTTAGT
AGTTCATGCCGACAATCGGAACTGCAGACGATATGTCAAATGTACTGGCATAGGATATAC
AACCTTGAGGGGGATAAATTTGAACTAGAACGAGCAATCGAAATTAAGAAAATGGAGCTC
AAGAGTATAATACAGGAGTATTATGACCGCATGTATGTGTGTGAGGGCCAGAAGTGGGAT
TTGGAACACGAAGTCAGGAAAAGAGATTATGAGATCGCAGACCTGAACTCTCAAGTAAAT
GACCTCAGAGGCAAGTTCGTTAAACCAACACTGAAGAAGGTGTCCAAGTACGAGAACAAA
TTCGCTAAGCTCCAGAAGAAGGCCGCTGAGTTCAATTTCCGTAACCAATTGAAGGTCGTC
AAAAAGAAGGAATTCACCCTTGAAGAAGAAGACAAAGAGAAAAAACCAGACTGGTCCAAG
GGCAAGCCAGGCGATCAGAAGGTAAAGGAGGAGGAGGTTGAGGCATGA
Protein sequence:
MADDEKKRLEEAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKK
AAEELKKEQERKAAERRRIIEERCGKPKNVDDANEDALSRVCKEYHTRIGKLEDEKFDLE
YIVKRKDMERLSRASLPVIISVSRNSKRRSTITRWKLPAEHLRSDLLWTIGNLCYALRFS
SSCRQSELQTICQMYWHRIYNLEGDKFELERAIEIKKMELKSIIQEYYDRMYVCEGQKWD
LEHEVRKRDYEIADLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVV
KKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVEA