| New model in OGS2.0 | DPOGS211218 |
|---|---|
| Genomic Position | scaffold1485:+ 5679-6747 |
| See gene structure | |
| CDS Length | 414 |
| Paired RNAseq reads | 7932 |
| Single RNAseq reads | 44952 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003197 (4e-61) |
| Best Drosophila hit | ribosomal protein S18, isoform A (1e-53) |
| Best Human hit | 40S ribosomal protein S18 (3e-49) |
| Best NR hit (blastp) | RecName: Full=40S ribosomal protein S18 (9e-74) |
| Best NR hit (blastx) | RecName: Full=40S ribosomal protein S18 (3e-60) |
| GeneOntology terms | GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0022627 cytosolic small ribosomal subunit GO:0006413 translational initiation GO:0005840 ribosome GO:0003723 RNA binding GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR001892 Ribosomal protein S13 IPR010979 Ribosomal protein S13-like, H2TH IPR018269 Ribosomal protein S13, conserved site |
| Orthology group | MCL10904 |
Nucleotide sequence:
ATGAATACGAATATTGATGGCAAACGCAAGGTTATGTTTGCTATGACCGCTATTAAGGGA
GTCGGTCGTCGATATTCTAATATTGTATTGAAAAAAGCCGACATCGACCTGGACAAACGT
GCCGGGGAATGTACGGAAGAAGAGGTTGAGAAAATTGTAACAATCATGTCACATCCGAGA
CAATACAAAATCCCCGATTGGTTCCTCAACAGACAGAAAGACATTGTTGATGGCAAGTAC
AGCCAATTGACGTCATCCAACTTGGATTCCAAGCTCCGTGAGGATTTGGAAAGGTTAAAG
AAGATCAGGGCTCACAGAGGCATGCGTCACTACTGGGGTCTCCGTGTGCGTGGTCAACAT
ACCAAGACCACCGGCAGACGCGGTAGAACTGTTGGTGTGTCCAAGAAGAAGTAA
Protein sequence:
MNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSHPR
QYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH
TKTTGRRGRTVGVSKKK