| New model in OGS2.0 | DPOGS208515 |
|---|---|
| Genomic Position | scaffold393:- 58802-63906 |
| See gene structure | |
| CDS Length | 2262 |
| Paired RNAseq reads | 973 |
| Single RNAseq reads | 2320 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008452 (0.0) |
| Best Drosophila hit | CG1582 (8e-126) |
| Best Human hit | putative ATP-dependent RNA helicase DHX57 (8e-80) |
| Best NR hit (blastp) | PREDICTED: similar to ATP-dependent RNA helicase [Nasonia vitripennis] (9e-167) |
| Best NR hit (blastx) | PREDICTED: similar to ATP-dependent RNA helicase [Nasonia vitripennis] (2e-155) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0004386 helicase activity GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005524 ATP binding |
| InterPro families | IPR006575 RWD domain IPR000571 Zinc finger, CCCH-type IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR014001 DEAD-like helicase |
| Orthology group | MCL10204 |
Nucleotide sequence:
ATGGATTACAACAGCAAACAATTGGCTGAAGACCTCTTTCTTCGGGTTCCAGTAGACGCT
CGAATAAGAAAACCCGTAGAAGAAGTAGAAGAACATCATCCAAAACTGAAGGTTGAAATG
CAAACTATTCGGTTGAACCCTGACTCACAGAAGCTTGTGTTGGATACTTTACGCTTTATA
CACGGTCCCGATTTCAAACTGAACAGTGCCAGCCTTTACAAGGATAAGGGTACAAATTTC
AGTAAACAATATTGGTTGGAGCGAGGTAACCTTATAGTGCGTGGTGGTTGTGACTATTCT
ATACAATCTCAACCAGATATGAAATCCTCTGAAGTTAGGTTGAGGGAATTTGCTTTGGCT
AAGTTGGAAAAGTACTGTTTCCACAAGGCTCATTGTGCAGAGGCTTTAGAAAACGCAGCT
GAAAACGTCGAAAAGGCTTTAGAAATTCTATTTAAAAAATATTACAATTTTACAACATTA
GAAAACAATGAGAATTATCCACCGAAATCTGAGTTGTTGGATATGAGGAATGATGAGAGA
GCTGTACTGGAATCTATATATGAGAATAGTTTCAGAGTTAGAGATGCAAATGTTTGGACA
GTTGATGTCAAGTTGGATTACATAACGAGAATGTATGCGGCCGACAAAGTAAAGAAAAAG
AAAGAAAATATAAATTACAATACAAATTTCAAAACGAAAAAGAAAGAACTATGCAGACTG
TTCCTGAACGGTAACTGTAGATTTGGCGCGAAATGTAAATTTACACATGAAACGAAAGAC
GATGAAAAGCTAGAAGAAGTAGAAAAGGAATCTGTTACTTACGAATTAGAAATACGGTTC
CCAGAAGATACATACTACCCGCATGAATCACCGATGTTGTTTGTCAAAGCCAATAGCAGT
TCAAATTTAATACCGACCATTACTTGCCTAAAAATTGCTGCCAGGTTGTACGACGAAGCC
AAAACATTAGCCCTAGATGGTATACCCAGCATATACTCACTAGTTGAATTACTTAGTAAT
GAAGACGATATAGTTAATTTTATTAAATTTGACACTAGACAATTTCCTCAGGCTTCGGAC
ATGTTGTTCCCTCAATTGTTAGAAAGTAATAATGCCGATAGCCAAACCAAACCAACACAT
TATAAAAAAGGTGATTCGAGGGATCATAGACAAAATGTAAATTTCGATGAATTGCTCAAA
GATAATAATGAAATAGCGAAACGTTATATGGAAAAAAGTGACAATAATAGATATAATAAA
ATGATGTCTTCGAGAAGAAAACTTCCTGCTTGGCAAAAAAGAAAAGAAATATTACAGGCT
ATGGAAAAATCTCAGGTAATAGTTATCAGCGGTGAGACGGGTTGCGGTAAAAGCACTCAG
GTACCGCAGTATATTTTGGACAATTGGCTAGAAAATTATATAGGAAACCATGTTGAGATA
GTGTGTACGCAACCCAGACGTATATCAGCTATAGGTGTTGCTGACAGAGTGGCTGAAGAG
AGAGTCGAAAAGACTGGACAAGTTGTTGGGTATCAGGTAGATATTAATTTTTTGAGTGTC
ATACCTATATGTGTAGGTTTATATTTGTTGACCTCATTCGCTTACAAATATGAATCTATT
GTGATAGTTCTATTTGAGATTGTTGTGGAAAAATTATTGTATAACAAATATAATATTTGC
ATTGTGAAATTTATGATATTTTTAACTTATACGGACTTGAGAGTCATATTGATGAGTGCG
ACTCTGAATGCGGAGCTGTTCTCGGATTATTTTGACAAGGTTCCAGTCTTGGAGATTCCT
GGCAGAACTTTTCCGGTGGAACAATACTTTTTGGACGACATTTTGGATATGACAGATTAT
ATAATGGAGGAGAACGGACCTTTTGCTCGTAAAATTAAGAAAGGTGACAAGGACAAAAAG
TTTGATTTCGAAACCGAGTTAGAAGCCTGCGATGTCAAGTCAGAATCCACTGAGCCGCCG
AAGATAGTGATTCGTGACGAAAATCTAACGATATCACAAATAGTAGCGAGATATCCCAAA
CTTAGTAAGAAAGCATGCAAAAACCTATACCTCATGGATACTGAAAAGATAAATTTGGAA
CTCATAGAGCATGTTCTGACATACATCGTATCTGGACACCATTCGTGGCCGACAGAGGGC
GCTATTTTAATATTCCTGCCTGGTATAGGCGAAATAATGTCGTTATACGATCAGTTGATT
GACAGTCATACGTTCAGCCCGAATCTTGCCCGTTTATGTTAA
Protein sequence:
MDYNSKQLAEDLFLRVPVDARIRKPVEEVEEHHPKLKVEMQTIRLNPDSQKLVLDTLRFI
HGPDFKLNSASLYKDKGTNFSKQYWLERGNLIVRGGCDYSIQSQPDMKSSEVRLREFALA
KLEKYCFHKAHCAEALENAAENVEKALEILFKKYYNFTTLENNENYPPKSELLDMRNDER
AVLESIYENSFRVRDANVWTVDVKLDYITRMYAADKVKKKKENINYNTNFKTKKKELCRL
FLNGNCRFGAKCKFTHETKDDEKLEEVEKESVTYELEIRFPEDTYYPHESPMLFVKANSS
SNLIPTITCLKIAARLYDEAKTLALDGIPSIYSLVELLSNEDDIVNFIKFDTRQFPQASD
MLFPQLLESNNADSQTKPTHYKKGDSRDHRQNVNFDELLKDNNEIAKRYMEKSDNNRYNK
MMSSRRKLPAWQKRKEILQAMEKSQVIVISGETGCGKSTQVPQYILDNWLENYIGNHVEI
VCTQPRRISAIGVADRVAEERVEKTGQVVGYQVDINFLSVIPICVGLYLLTSFAYKYESI
VIVLFEIVVEKLLYNKYNICIVKFMIFLTYTDLRVILMSATLNAELFSDYFDKVPVLEIP
GRTFPVEQYFLDDILDMTDYIMEENGPFARKIKKGDKDKKFDFETELEACDVKSESTEPP
KIVIRDENLTISQIVARYPKLSKKACKNLYLMDTEKINLELIEHVLTYIVSGHHSWPTEG
AILIFLPGIGEIMSLYDQLIDSHTFSPNLARLC