| New model in OGS2.0 | DPOGS208516 |
|---|---|
| Genomic Position | scaffold393:- 54849-58760 |
| See gene structure | |
| CDS Length | 1461 |
| Paired RNAseq reads | 657 |
| Single RNAseq reads | 1495 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008452 (0.0) |
| Best Drosophila hit | CG1582 (2e-153) |
| Best Human hit | putative ATP-dependent RNA helicase DHX57 (2e-132) |
| Best NR hit (blastp) | PREDICTED: similar to ATP-dependent RNA helicase [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | ATP-dependent RNA helicase [Aedes aegypti] (1e-175) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0004386 helicase activity GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005524 ATP binding |
| InterPro families | IPR007502 Helicase-associated domain IPR011709 Domain of unknown function DUF1605 IPR001650 Helicase, C-terminal |
| Orthology group | MCL10204 |
Nucleotide sequence:
ATGGTGTTCCAGAAGCCGAGAGATGGCGCTAGGAAGATAGTTCTCTCAACTAACATAGCG
GAGACATCCGTGACCATAGACGACTGTGTCTTTGTTGTCGACTGTGGAAGAATGAAAGAG
AAACGCTTCGATTCCAACCGCAATATGGAATCTCTGGATCTGGTGTGGGTGTCTAGAGCC
AACGCTAAGCAGCGGAAAGGTCGCGCCGGTCGGGTGATGGCCGGAGTTTGTATCCACCTG
TTCACATCGCACAGATATAATTACCATCTCTCAGAACAGCCCGTCCCGGAGATACATAGA
GTGCCGCTGGAACAGCTGGTGCTGAAGCTGAAGATATTACCGCTGTTCCGGAACATGGGC
GTGCATGAGGTGCTCGGTAAAACAATCGAACCCCCTTTGAAATCTAACATAGATGGCGCG
CTGATAAGATTGCAAGATGTTGGGGCGCTGGACAAAATGTATGCTCTAACGGCTCTTGGC
AAGCACCTGGCTGCCCTGCCAGTGGATGTCAGGATTGGGAAACTCATGTTATTTGGCGCT
ATATTCTGCTGTGTCGATTCAGCTTTGACGATGGCAGCATTTTTGAGTCACAAAAGCCCA
TTCCTGGCGCCGTTTGGTAAAAAATCGGAGGCTGATGCAAAGAGGAGAGAATTCGCGTGT
TCTAACAGCGATCAGCTGACGACGTTGAGGGCTTATAGAAAATGGCAACAAGCGCTGAAA
CAAAGCACACACTCAGCTCTGGTATTCGCTAACGAGAACTTTTTGTCGCACAAGACGCTT
GTAATGTTAGCTGATATCAAGCATCAGTTGCTTGGTCTTCTCGCGTCGATAGGCTTCGTA
CCAGACATGCCGGGCTTGAGGAAGAAGATGTATAAGGATTCCGTCCAAGCTCTCACAGGT
GAAGAGCTAAACTGTAATGGAACGAATGATAAACTTCTGGCCGCTATACTGTGTGCTGCG
TTGTATCCTAACGTTGTGAAGGTTTTGACCCCGGAGAAATCTTTCCATATGCAAATAGGA
GGCGCCATACAGAGGCAGCCTAATCCCGATGAACTGAAGTTCAAAACCAAGTCTGACGGC
TACGTTGTACTCCATCCATCGTCAGTTAACTCAAACGTCGGCTACTTCACCAGCCCCTAC
TTAGTTTACCAAGAAAAAGTTAAAACGACGAGGGTTTTTGTCAGAGAATGTTCTATGGTG
CCGCAGTTGCCGTTGGTGCTATTTTCAGGTTGTAATTTGTCAGTGGAGCTTCACAATGGG
ACGTTCATAGTGTCCTTGGAGGATGGATGGATCATGTTTCAAGTTGAGGAGCACGAGGTT
GCTGAAATGTTGAAAACGATCCGAGCGGAACTCATCAGCCTGCTGGAAGAGAAAATTAAT
GATCCATCGTTAAATTTGTTGCACCACGAGAAAGGAAACAGAATTATCAAAGCGATTGTC
CAAATAATTACTAAAGACTAA
Protein sequence:
MVFQKPRDGARKIVLSTNIAETSVTIDDCVFVVDCGRMKEKRFDSNRNMESLDLVWVSRA
NAKQRKGRAGRVMAGVCIHLFTSHRYNYHLSEQPVPEIHRVPLEQLVLKLKILPLFRNMG
VHEVLGKTIEPPLKSNIDGALIRLQDVGALDKMYALTALGKHLAALPVDVRIGKLMLFGA
IFCCVDSALTMAAFLSHKSPFLAPFGKKSEADAKRREFACSNSDQLTTLRAYRKWQQALK
QSTHSALVFANENFLSHKTLVMLADIKHQLLGLLASIGFVPDMPGLRKKMYKDSVQALTG
EELNCNGTNDKLLAAILCAALYPNVVKVLTPEKSFHMQIGGAIQRQPNPDELKFKTKSDG
YVVLHPSSVNSNVGYFTSPYLVYQEKVKTTRVFVRECSMVPQLPLVLFSGCNLSVELHNG
TFIVSLEDGWIMFQVEEHEVAEMLKTIRAELISLLEEKINDPSLNLLHHEKGNRIIKAIV
QIITKD