| New model in OGS2.0 | DPOGS205535 |
|---|---|
| Genomic Position | scaffold2284:- 21320-23960 |
| See gene structure | |
| CDS Length | 2169 |
| Paired RNAseq reads | 870 |
| Single RNAseq reads | 1931 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000085 (1e-151) |
| Best Drosophila hit | crooked legs, isoform D (5e-15) |
| Best Human hit | PREDICTED: zinc finger protein 84-like (4e-21) |
| Best NR hit (blastp) | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein dp) (ZNF-dp) [Acyrthosiphon pisum] (1e-23) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_223126 [Branchiostoma floridae] (2e-31) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0003677 DNA binding GO:0005622 intracellular |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL39403 |
Nucleotide sequence:
ATGGAAGCTCAAGACTGTCAAGCAGATAGTACAGACAAAATTGATACCGATATACCAATT
AAAGAGGAAGATGCAAGTCATGTTATAGAAGACATCAAAACAGATATATATGACGCCAAT
GAACTGGTCAATTTATATGACGACACAGATGTGGATATCAAAGCGGAGTTCAGTCCAGTT
TTTGAACAGGTGGAGGTAGCACAGGACAAGGAATTGATATCTGAAACATTAGTTTATGAG
GAGCCGCTGCACTTTGATGGGATCAAGAGTGAAGATGAGATTGACGATGAGATAGACGAT
GAAGGAGATGATGAAGTTAATAATGAAATGGGTTATTATAATTACAATGAGGGAAGTTTG
GACAGCGAGGAAGCACAGGCTTTAAATAATGTCGAGGCCTGTTTAAGAGATGACATAGAT
GTTAAAAATGAATATGCAGAACCCATCAAAACGGAAGACATCAAAGAAGAAATGGGAATA
ACTGTAACAGAAACAAGTTTAATATCAAATAAAGTGATAAACACAACATCCACCATAACA
AACGCTCCGGATGGCTTAATACAGTCACAGACAACCAAGACGCTGGTCATGGAAATCCAT
CCCATGGTCCAGGGAAATGTCCCATACAATAGAATAGAAGAAAAGATATTGTCGACCAAC
TATGACAACGACCTCGATGATTCATTCCAATTGAATTCAATAACCGGGGATGTTCTGACG
TTGGAGCAGGAAGCGTATGGCTTACTGAAGACCGATCATTACCACCCCGACGATAGAGAC
TTCTACTGTCACAAGTGTGATAAGGAGAAGGAACATTTGAAGGTCAAAAGTTCAATGGAG
AAGAGGGCTGTGGACATCATGAATGGACTGGACTTTAAAATGGAGGACGAACTGGATTAC
AGCTTCGATAAGAAGCCTAGGTTGGATGATTCGGAGACGGAAGTGATTAAGAAGGAAGGA
TACGAGTGCAGTTGTGGAGAAGTTTACAAACGGAAGAGCAGGATGTTGACGTGCCTGAGG
TCCCACGAGATGTACGACGACACCGACTGCTTCTCCTGCAACTCCTGCACGAGGCAGTTC
AAAGACAAACAGCAGTTGAATCTGCACAGGAAGAGGTTGCATCGGAAGAGGTTCCCGTGC
AAATTCTGCCCGACGGACTACGAGACCAGGAAGGAGCTGTTCAAACACCTACAGATACAT
CAGAAAGTCCAATTGATGGAGTACAAGGTCATAACGGAAGTCGTGAAGGGCAAACAGAAG
TTGATATGTTTCATGTGCTCCAAGTCCTTTTCCGATTTGTCCGAATTGAAATGTCACATC
ATGGACGAACATAAGGAGCCGTACGTCTGTCAGGCCTGCGACAGTTCCTTCACGAAGATC
ATAGATTTCTGCGAACACACCAAGAGCTTCCACCCGGAGGTCGAAGGTCAATCCGTCTTG
GACGTCCTAGAGGCGTTCTCCAAACTGGTCCAAGCCTGGAAGTGCGATGAGTGCAACCTA
CAATTCTATCAAGCTGATAAGTTCGCTAAACACCAACTGGAATCACATGGCTCGGATTCC
AAGGCCAAGGATCAGTTTCAGTGTGATGACTGTTTGAGAGTATTCGTCAGTCAGAAAGGT
CTGACGTCCCACAGGCGGATCCATCACAACACGCCGAGCGCCGAAGAGACGGAGGCGATC
CAACAGGGAGTTATGTGCGTCGAGTGCAGGAAGATATGCAAGGACATGGACGCTCTGACG
TCACACATGCGGTTCCACTCGCCGGACAGGAAGTACCCCTGCAAATTCTGCGACTTCCGG
TTCGCGACACCAGAGAAGAGGAAGGCCCATGCGGAACTACACACCGGGGACATGAAATAC
GTGTGTTTTATATGCGAGTACCAGTGCAGCTCGGAGAACAGGCTCCAGCAGCACAAGCTG
TCCGTGAAACACGCTAACATGAAGGCGTACCTGACCACCGGAAAGCCGATCATAGACGAG
CCGGCGAGGAGCGACTCGAAAGAGACGTGTAAGAAGAGAAGAGACTCATCATCAGAGGAC
GAGGAGGCCGTGTGCGACGTGTGCGGGCAGGCGTTCAGGAACGAGGACGACATGCTGGAG
CATAAACAGACGCATCCCTTCATAGAGTTCCCGAACGAAGACAAGCCTACTAGAATATTC
TTCAAATAG
Protein sequence:
MEAQDCQADSTDKIDTDIPIKEEDASHVIEDIKTDIYDANELVNLYDDTDVDIKAEFSPV
FEQVEVAQDKELISETLVYEEPLHFDGIKSEDEIDDEIDDEGDDEVNNEMGYYNYNEGSL
DSEEAQALNNVEACLRDDIDVKNEYAEPIKTEDIKEEMGITVTETSLISNKVINTTSTIT
NAPDGLIQSQTTKTLVMEIHPMVQGNVPYNRIEEKILSTNYDNDLDDSFQLNSITGDVLT
LEQEAYGLLKTDHYHPDDRDFYCHKCDKEKEHLKVKSSMEKRAVDIMNGLDFKMEDELDY
SFDKKPRLDDSETEVIKKEGYECSCGEVYKRKSRMLTCLRSHEMYDDTDCFSCNSCTRQF
KDKQQLNLHRKRLHRKRFPCKFCPTDYETRKELFKHLQIHQKVQLMEYKVITEVVKGKQK
LICFMCSKSFSDLSELKCHIMDEHKEPYVCQACDSSFTKIIDFCEHTKSFHPEVEGQSVL
DVLEAFSKLVQAWKCDECNLQFYQADKFAKHQLESHGSDSKAKDQFQCDDCLRVFVSQKG
LTSHRRIHHNTPSAEETEAIQQGVMCVECRKICKDMDALTSHMRFHSPDRKYPCKFCDFR
FATPEKRKAHAELHTGDMKYVCFICEYQCSSENRLQQHKLSVKHANMKAYLTTGKPIIDE
PARSDSKETCKKRRDSSSEDEEAVCDVCGQAFRNEDDMLEHKQTHPFIEFPNEDKPTRIF
FK