New model in OGS2.0 | DPOGS214135  |
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Genomic Position | scaffold2257:+ 11465-15940 |
See gene structure | |
CDS Length | 1353 |
Paired RNAseq reads   | 42 |
Single RNAseq reads   | 102 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006182 (8e-167) |
Best Drosophila hit   | glial cells missing (8e-66) |
Best Human hit | chorion-specific transcription factor GCMb (2e-52) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC014730 [Tribolium castaneum] (8e-104) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP007783-PA [Tribolium castaneum] (2e-92) |
GeneOntology terms    | GO:0007403 glial cell fate determination GO:0005634 nucleus GO:0003677 DNA binding GO:0007516 hemocyte development GO:0006952 defense response GO:0042387 plasmatocyte differentiation GO:0010001 glial cell differentiation GO:0042063 gliogenesis GO:0030097 hemopoiesis GO:0003700 sequence-specific DNA binding transcription factor activity GO:0042688 crystal cell differentiation GO:0008283 cell proliferation GO:0045449 regulation of transcription GO:0048813 dendrite morphogenesis GO:0035164 embryonic plasmatocyte differentiation GO:0035169 lymph gland plasmatocyte differentiation GO:0006355 regulation of transcription, DNA-dependent GO:0042690 negative regulation of crystal cell differentiation GO:0035165 embryonic crystal cell differentiation GO:0031290 retinal ganglion cell axon guidance GO:0030182 neuron differentiation GO:0021782 glial cell development GO:0060857 establishment of glial blood-brain barrier GO:0045610 regulation of hemocyte differentiation |
InterPro families   | IPR003902 Transcription regulator, GCM-like |
Orthology group | MCL13563 |
Nucleotide sequence:
ATGGTTATCCTCACCAATCTCGCCGACATGTCCGAAGCCCCCTCGAGCCCCGAGTGGGAC
ATCAACGACGCGTCCGTGCCGCGGGTGACCAGCTTCGACACTTTCAGCGAGTGGTGCGAC
GGGCACGTGAGGAGAGTGTACGGCCCCGCCTGCGAGGAGGCCCGCAGACACTCCTCGGGC
TGGGCGATGAGGAACACCAACAACCACAACGTCCACATCCTCAAGAAGAGCTGCCTCGGA
GTGCTCGTGTGCTCGTCGAGATGTCGCCTGCCCGACGGCAGTAGAGTACACTTACGACCG
GCCATCTGTGATAAGGCGAGGAAGAAACAACAAGGCAAGCCCTGCCCCAACCGCGTGTGC
AACGGGGGCCGGCTCGAGGTCCAACCGTGTCGAGGGCACTGCGGCTACCCGGTCACACAC
TTCTGGCGCCACACGGAACACGCGATATTCTTCCAAGCCAAGGGATCCCACGACCATCCT
CGACCCGAGGCCAAGGGAGCCAGCGAGGTGCGGAGGTCGCTCGGCGCCGGCAGACGGGTC
CGCGGGCTTGCCCTACTACTGGCGAGGGAGGCCGCCATCGCTGACAAAATACTGACCGTC
AAACAAGACAAGCAAATGACACACAAGAATAACATCCACGCACCGCCCCCGCCGCTCATA
CCAGACAACCAACGATCCTTAACCTGCACGTGCGGACCGTTCGAATGCAACTGTCGGTGG
CGCTCCGAGTCGGCGGCGGAGCCCTACGCGGCGGCGGCGTGGACCCCCAGCGAGCACCAG
TCCTACACCGCTTACATTCCCCCCATACAGCCCACACCGGCGGCTGCGTCACACACGTAC
GACCCCACCTCCTTGCCGGCGGACGACATCTTCCATCCAGAGGAGATATTCCAATTGGAT
CAACCGATCCGCCTAGACTTCCCCCTCGAGGACAATACCTTGGAGTCTCCGCCGACGTTC
GCGGATCTCAACAGCGACACCTCCAGAGCCGACGACGCCTATTGGTTGGAGTGGCAGAGA
CCCGCGGTCGGCTCGGACGCCAGCGACACGCCGTCCCCCGAGCTCTTCAACAACTACCAA
CAGACGGAGCCCTACTGCGAGCAGCCCTACATACACCAGAACTACTACCCGGAGGAGGCG
CAGTACTACCCGATGGAGCACATGAGAGAGTCGCCGGGGATGGAGGGTCAGGGGCAGAGG
TACTTCCGGTACGGTCAGGACTGCGAGCCCAACAACATGGACGTCCACACGTGGAACTAC
TCCGACTGCGCGTTCAGCAACCAGCCGGCGGAGTCCAAGGAGTACTACAACGTGCACTCG
CTGAGCGTGAACACCTTCAACCCGCTGTTATAA
Protein sequence:
MVILTNLADMSEAPSSPEWDINDASVPRVTSFDTFSEWCDGHVRRVYGPACEEARRHSSG
WAMRNTNNHNVHILKKSCLGVLVCSSRCRLPDGSRVHLRPAICDKARKKQQGKPCPNRVC
NGGRLEVQPCRGHCGYPVTHFWRHTEHAIFFQAKGSHDHPRPEAKGASEVRRSLGAGRRV
RGLALLLAREAAIADKILTVKQDKQMTHKNNIHAPPPPLIPDNQRSLTCTCGPFECNCRW
RSESAAEPYAAAAWTPSEHQSYTAYIPPIQPTPAAASHTYDPTSLPADDIFHPEEIFQLD
QPIRLDFPLEDNTLESPPTFADLNSDTSRADDAYWLEWQRPAVGSDASDTPSPELFNNYQ
QTEPYCEQPYIHQNYYPEEAQYYPMEHMRESPGMEGQGQRYFRYGQDCEPNNMDVHTWNY
SDCAFSNQPAESKEYYNVHSLSVNTFNPLL