| New model in OGS2.0 | DPOGS201954 |
|---|---|
| Genomic Position | scaffold849:- 21216-33560 |
| See gene structure | |
| CDS Length | 2742 |
| Paired RNAseq reads | 6677 |
| Single RNAseq reads | 16132 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011368 (9e-180) |
| Best Drosophila hit | CG14619, isoform C (7e-81) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase 2 isoform a (2e-95) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin specific protease 41 [Nasonia vitripennis] (5e-158) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin specific protease 41 [Nasonia vitripennis] (4e-150) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0008233 peptidase activity GO:0008234 cysteine-type peptidase activity |
| InterPro families | IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
| Orthology group | MCL13316 |
Nucleotide sequence:
ATGCCAGTCGTATCACCGTCTCGTTACACACCAACATCTTCAACGCTCACCGGATCCTAT
CGATCTACCCTCACATCCTCGTCCAGCATCGACAAGCCATACTATAGGAGTTCCAGCGGC
ACGTACGTCACGTCCACACTCAGAAGCAGCTACGGTGACAGAACAACAGAGTATAGATCG
AGATACAGCGATGTGGACGGGAAGAGAGAGAGGAAGACGTCACTCGTAGAATATTCTAGA
AGCTCTAGAGCACCGAGCGCTACCGACTCGGATAGCGGTATATCCAGTCGTTATAGATCT
GACAGAAGCGAATCTAGATCTAGAGATGTTTCTACAACTAGAAGCGAGAGTTCAAGGAAT
GATAGGGGAAAGAGGAACATAATTAGCACAGCGGCGCTGGCTATGTCGACAGCGGAGTTA
TACAATAAGTACAGTCCAGCGAATTACGTGCCCCTGACGCAGAGGATACAGCAGCAGAGT
CAGAACAACTACAGCGAAATATCTAGATCCAAATCCATATCCAACGATATAGGAAGACCA
CCAGCACCGGAATGCAGGGTCAGGAAACCGAGGAACTCAGCGGCGACTATATCAGAGAAA
CCGGAAAACAGAAGATACAAGGACGGCTCGCCGACGCCGAGCTACAGCAAGAGAGCGTCC
ATGACGAACGGGTCAAGGGACAGCAACGGGAACGAAGTGCCTTCCGTCAGTGACATAAAG
AAACGGTTCGATCCCAAAATGACCGTCACTAAACTACCAGCTAACGACGTCAGGTACACC
AAGACCATGGAGCATTACCTGAACCAGCTGAAAGATTGCGAGAACGGTGTTGGTTACGCG
AAAACCAATCCCAAAGACGAAAAACCAGTGCCTATTCACTTGCCATACGCTGATAAGAAT
GGTGTCAACAGATATGAAGGCTCCCCCACCTCCAGGAACAGCTCGAATTCAGATCTCACC
ATCAGCAAGACGCTATCTGAACCAGTTTCCTTAGCTAAAACTTCCGTAGATAAGAATAAT
ATGATGTCCTCGTCACTAACCACCAAGCTTCCATCCGAACGACTAGCCAGCATCAAGAGC
CAATTAGACCCGAACAATCCGATAGGTAAAATATTAGAAAAATCAACAGTCATCCAGGTT
GAAAACGGCGATGCAGATTACAATGAACGGAACAGGATACGCTACAGTCCGGAAGTCAAA
ATAAAAGAATTGAAAAATGACATCGAGAAGCAAACAAAGACGCCAAAACATACCACGAAC
TTCGCTTCGTACATACAAATATCTCAACCGGTGGCGTCCGGAGCCACACCAAAGAAACAC
CTCGATGCCAACGAGGACGCCAAGAAAGAGAGGAAATCAATAAAATACATAGACTCAGAG
GAGGATAGACTAGTTCTAGAGAATGATATAGAATCTCCCAGCGGCACGGGCTTCGAGAAC
AAAACGTTCGAGCACGAGAACTTCATAAAGAAGAGAACGGAGAAGAATGAGACAGAAGAC
AAAGAAGACGGCATCAAGTCGATGGAAACTAGCACTGAGAGCACCATCAGTGAGTCCACA
GAGGACTCCAGTCCCGAAACGCCCTCTGCAAGAAGAAATCTCCTCGACTTAAAGGACTAT
GATTACATAAAGACGGAGTTGGCCGGCGGTAAAAGCGGTCCCAGCGGATTACGACGCAGC
CTCGAACGGGAAGTCAGCGAGAAATCTGAGAAGTCCAGTCAGACGAGCGGTCTGAACGGC
CTCAGGAACATCGGCAACACCTGCTTCATGAACAGCGTGCTTCAGTGCCTGTCGAACACT
CGGCCGCTGTTGGAATACCTCGTGGATGACAAATACAATTCCGACATTAACACTACACTG
TCTTGTATGAAAGGAGCGCTCATTAAAGCGTTCGCTAGCGTGATAAAGGAGCTGTGGCGC
AGTGGGGACAGGGACTGCGTGGTGAACACCACCGCGCTCAAGTCGCAGGTGCAGCGGTTC
GCGCCCAGGTTCATGGGATACAGCCAGCAGGACGCGCAGGAGTTCCTCCGTTATCTGCTG
GAAGGTCTGCACGAGGACGTGAACAGGGTCACCGTGAAGCCGAAGCCGATACTCACAGAG
ATAGATGATAGTCTCAGTGACTCTGCGAAGGCGGCTGAAGCTTGGAGTCGTTATTTACGA
ACTGAGGATTCTCGTGTGGGGGACATCTTCGTCGGTCAGCTCAAGTCCACATTAAGATGC
ACCCACTGCCTGCATGACAGTGTGACCTTTGACCCATTTTGGGACCTCAGTCTGCCGATC
CCCTCTCGCACTGGCAATTTAAAGCTGCAGCAGTGCTTGCAGCACTTCGTCCGGGAAGAA
GAGCTGGACGGAGACGAGAAGCCGACGTGCTCCAAATGCGGCGTCCGTCGCAAGTGCCTC
AAATGGTTCACAGTACACAAGTTCCCTCAAGTGCTGGTCCTGCATCTGAAGCGCTTCTCA
CCAACTGAACGCTTCCGCGGCAAGTTGTCTGTTGTGGTGGAGTTCCCTCTGTCTGGTCTC
GACATGTCACCGTTCGCTGCCTCGCCGACACACGCCACGTACAACCTGTACGCGGTCAGC
AATCATTCAGGCACCACCTACTCCGGACACTACACAGCGTACTGCAAACATCCCTACACC
GGTGACTGGCACGAGTACAACGACTCCAGGGTGACTCCCATCCGGTCCCGTGACATTGTC
TCAGCGGAGGCTTATGTTCTATTCTACGAGCTGGCCACGTAG
Protein sequence:
MPVVSPSRYTPTSSTLTGSYRSTLTSSSSIDKPYYRSSSGTYVTSTLRSSYGDRTTEYRS
RYSDVDGKRERKTSLVEYSRSSRAPSATDSDSGISSRYRSDRSESRSRDVSTTRSESSRN
DRGKRNIISTAALAMSTAELYNKYSPANYVPLTQRIQQQSQNNYSEISRSKSISNDIGRP
PAPECRVRKPRNSAATISEKPENRRYKDGSPTPSYSKRASMTNGSRDSNGNEVPSVSDIK
KRFDPKMTVTKLPANDVRYTKTMEHYLNQLKDCENGVGYAKTNPKDEKPVPIHLPYADKN
GVNRYEGSPTSRNSSNSDLTISKTLSEPVSLAKTSVDKNNMMSSSLTTKLPSERLASIKS
QLDPNNPIGKILEKSTVIQVENGDADYNERNRIRYSPEVKIKELKNDIEKQTKTPKHTTN
FASYIQISQPVASGATPKKHLDANEDAKKERKSIKYIDSEEDRLVLENDIESPSGTGFEN
KTFEHENFIKKRTEKNETEDKEDGIKSMETSTESTISESTEDSSPETPSARRNLLDLKDY
DYIKTELAGGKSGPSGLRRSLEREVSEKSEKSSQTSGLNGLRNIGNTCFMNSVLQCLSNT
RPLLEYLVDDKYNSDINTTLSCMKGALIKAFASVIKELWRSGDRDCVVNTTALKSQVQRF
APRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPKPILTEIDDSLSDSAKAAEAWSRYLR
TEDSRVGDIFVGQLKSTLRCTHCLHDSVTFDPFWDLSLPIPSRTGNLKLQQCLQHFVREE
ELDGDEKPTCSKCGVRRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGKLSVVVEFPLSGL
DMSPFAASPTHATYNLYAVSNHSGTTYSGHYTAYCKHPYTGDWHEYNDSRVTPIRSRDIV
SAEAYVLFYELAT