New model in OGS2.0 | DPOGS201905  |
---|---|
Genomic Position | scaffold1375:+ 20512-25029 |
See gene structure | |
CDS Length | 1644 |
Paired RNAseq reads   | 2884 |
Single RNAseq reads   | 6810 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006085 (0.0) |
Best Drosophila hit   | nop5 (0.0) |
Best Human hit | nucleolar protein 58 (1e-139) |
Best NR hit (blastp)   | PREDICTED: similar to nop5 CG10206-PA [Apis mellifera] (0.0) |
Best NR hit (blastx)   | GM13736 [Drosophila sechellia] (0.0) |
GeneOntology terms    | GO:0005875 microtubule associated complex GO:0006364 rRNA processing |
InterPro families    | IPR002687 Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain IPR012976 NOSIC IPR012974 NOP5, N-terminal |
Orthology group | MCL14561 |
Nucleotide sequence:
ATGTTGGTGCTATTCGAAACGCCGGCGGGATACGCTATATTTAAGTTACTTGATGAGTCA
AAATTATCACAAATAGATGATCTGTACCAGGAGTTCAACACGCCTGAAGGGGCTTCATCA
GTAGTGAAACTGAAGAATTTTATTAAATTTGAAGACACTACGGAAGCTTTAGCAGCAACT
ACCGCCGCTATTGAAGGCAAGCTTTCAAAGACATTGAAGAAAGGTTTGAAGAAGCATCTG
CTCAAAGATGTTCAGGATCAGCTGTTAGTCGGGGACGCCAAGCTAGGCAGTGCCATCAAA
GAGAAGTTTGACTTACAATGTGTATCAAATTCAAATGTACAAGAATTGTTGAGATGTATC
CGTTCCCAAATGGACAGTTTGCTGACGGGCCTGCCCAAGAAAGAAATGACAGCTATGGCT
TTAGGTCTTGCCCATTCACTGTCCAGATATAAACTGAAATTCTCTCCAGACAAAATTGAT
ACTATGATAGTACAAGCTCAATGTCTATTGGATGATTTGGATAAGGAATTGAACAACTAC
GTCATGAGATGCCGGGAATGGTACGGCTGGCACTTCCCGGAGCTCGGGAAGATTATAACA
GACAATACTTCATTCGTGAAGATCGTTAAGCTCATGGGTACCCGAGATCACGCGGCCACG
ACTGATATGTCGGACATTCTTCCGGAAGATCTGGAAGAGAAAGTCAAAGAAGCAGCCGAG
ATATCCATGGGAACGGAGATCTCTGATGACGATATTATTAATATACAGAACTTATGTGAT
GAGATTGTATCTATCACGGACTATAGAGCACATCTGACGGACTATTTAAAGGCGAGGATG
ATGGCCATGGCACCGAACCTGACAGTTCTGATCGGGGAGCATATAGGAGCTAGACTAATA
GCCCACGCTGGTTCATTAATGAATCTAGCTAAACATCCGGCTTCCACTTTGCAAATATTC
GGTGCTGAGAAAGCTTTATTCAGAGCTTTGAAGACTAAGAAGGATACTCCAAAGTACGGT
CTCATATACCACGCTCAGCTGATTGGACAATGTAGCACCAAAAACAAGGGCAAAATGTCG
AGAATGTTGGCGGCCAAGGCGGCGCTGGCGACACGTGTCGACGCCTTCGGTGATGATGTG
ACATTCGAGTTGGGAGCGAAACACAAAGTGAATCTTGAGAATAAGCTGCGGTTACTAGAA
GAAGGTAACTTGAGGAGAATCAGCGGCACGGGCAAGGCGAAGGCCAAGTTCGAGAAATAT
CACAGTAAATCTGAAGTGTTCTCGTACCCGACGGCAGCGGACAGCACCTTGAAGGCAGTG
AAGAGGGAACACGAGCCGGAAGAAGAAGCCGCTCCGGCCAAGAAGATGAAGCTGGAGAAC
GATGTCAAAGTAAAGAAAGTGAAATCAGAACCGTCAGATGAAGTGGACGGACAAGAGAAC
GGTGATTCAGAGCTGACTGAGAAGAAGAAGAAGAAAAAGAAGAAGTCCATGGAACCAGAA
CTGGCACAGGCTGGAGAACAATCTCCGGTCAGTGAGAAGAAAAAGAAAAAGAGCATGGAA
CCAGAACTAGCACAGAGCGAAGAAGCACCCGCGAGCGAAAAGAAGAAAAAGAAGAAAAGA
CAATCTCAGCCCCAAGAAGAATGA
Protein sequence:
MLVLFETPAGYAIFKLLDESKLSQIDDLYQEFNTPEGASSVVKLKNFIKFEDTTEALAAT
TAAIEGKLSKTLKKGLKKHLLKDVQDQLLVGDAKLGSAIKEKFDLQCVSNSNVQELLRCI
RSQMDSLLTGLPKKEMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNY
VMRCREWYGWHFPELGKIITDNTSFVKIVKLMGTRDHAATTDMSDILPEDLEEKVKEAAE
ISMGTEISDDDIINIQNLCDEIVSITDYRAHLTDYLKARMMAMAPNLTVLIGEHIGARLI
AHAGSLMNLAKHPASTLQIFGAEKALFRALKTKKDTPKYGLIYHAQLIGQCSTKNKGKMS
RMLAAKAALATRVDAFGDDVTFELGAKHKVNLENKLRLLEEGNLRRISGTGKAKAKFEKY
HSKSEVFSYPTAADSTLKAVKREHEPEEEAAPAKKMKLENDVKVKKVKSEPSDEVDGQEN
GDSELTEKKKKKKKKSMEPELAQAGEQSPVSEKKKKKSMEPELAQSEEAPASEKKKKKKR
QSQPQEE