| New model in OGS2.0 | DPOGS200336 |
|---|---|
| Genomic Position | scaffold2352:+ 4038-6151 |
| See gene structure | |
| CDS Length | 1668 |
| Paired RNAseq reads | 47 |
| Single RNAseq reads | 150 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010448 (1e-110) |
| Best Drosophila hit | CG9512 (5e-75) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (5e-52) |
| Best NR hit (blastp) | putative ecdysone oxidase [Heliconius melpomene] (0.0) |
| Best NR hit (blastx) | putative ecdysone oxidase [Heliconius melpomene] (0.0) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IPR012132 Glucose-methanol-choline oxidoreductase |
| Orthology group | MCL25373 |
Nucleotide sequence:
ATGCCGGGTCCATCACGTGACCGTAACGTCTATGATTTCATTGTGGTGGGAGGGGGAACA
GCTGGCAGCGTTATAGCGTCGAGACTTACTGAAGTCAAGGAATTCAATGTTCTACTGATT
GAAGCTGGTTCTGTCTCTCCACTCCAATGTTTAATTCCCGGATTGGTCCAGTATAACCCG
AATTCCATAGTTGACTGGAACCATACTGCTCAAAACGATGGTTATGCAGCACAATGTCAC
AAAAATGGTGTGATGAGGCTTCCGCAAGGCAAATGTTTAGGAGGGACTAGTTGTTTTAAT
TACATGTTTTACAACCGTGGTAGCAAATACGACTACGATAGTTGGGCAGAAATCGCTAAA
GACAGCACTTGGAATTGGGATAATGTGGTACCATATTTTATAAAAAGCGAAAATTTATTG
GACAATGATATACTAAAGTCACCTGATGGAACACTTCATGGTACAAAAGGTTACATTAAC
GTGACAAGGGAATTAAGCGATAGAGCACTCGAATACCTTAAAGCCCTCGAAGAAGTCGGA
GAGTCTTCAGTTGAAGACGTTAATGGGCAAGAATTTATTGGTTATACTCAGCCAATGTTA
ACATTATCAGGCGGCGTAAGGCAAAGTACGAGTGTTTGCTATATTACACCTGCCAAAGAC
CGCGAAAATTTGAAATTCATGAAGAATTCTCTAGTATCAAAAATTACAATTGATGAAAAT
GGGAGGGCGCGTGGTGTCGAAATAATAACAAAAGATAATAAAAAAATATCTGCGTACGCC
AAAAATGAAATAATTGTTACTGCCGGAGTTATAAACAGCCCGAAGCTTCTTATGTTGTCA
GGCATTGGTCCTAAAAGACACCTTAAGTCGTTAAACATAAAAGTTAATTCAGATTTACCA
GTAGGCCGCAATTTGCAGGACCATAATTTAGTACCATTGTATATTGAAATGGAAGAATCT
AAAGAGCCCGTTATACCTCGCAACCCTCACAAACATCCCTTTGATATGGTCACAGGTTTC
GCATCTTTAAATAAGGATAAACCATATTATGCAGATTATCAAACACAAATATTTATAGTA
CCACACGGTTCACAAATGCCTGTACAGTATTTTACTAATGATTTTATGTACGAGGAAGAT
GTCTCCGAAAGGTTAAATGAAGGTAGCAACAGAGGAAATGCTGCCGTAGCCTTGATTGTC
AACCTCCATCCAAAATCTAAAGGACAGATTCTTTTAAAAACCACAGACCCAAATGACAGC
CCTCTAATTTATTCAGGAATCTTTTCTAATAGAAGAGACTTAGATAATACCGTTAAATAT
GTGAAAGATTTTGTAAAAGTTATGAATTCAGAACACTTTAAAAAAAATAACGCTAGTGTG
GTGGACTTGTCAAATAAGCGTTGTGGACCTTTTGACCTTAATAGCACCGTCTTTTGGGAA
TGCTACAGCCGTTGTATGACAAACATTGCTTTTGATATGATTGGCACGTGTGCCATCAGC
AAAGTTGTAGATAGTCAATTAAAAGTTATTGGGGTGGATGGATTGCGAGTGGCAGACGCG
AGCGTCATACCCTTACCGATCGGTGCAAATCTGTATGCTCCGGTCGTGATGGTTGCTGAA
AAAGTGTCAGATATGATAAAAAACGAGTACCAGAGCCAAAATAAATAA
Protein sequence:
MPGPSRDRNVYDFIVVGGGTAGSVIASRLTEVKEFNVLLIEAGSVSPLQCLIPGLVQYNP
NSIVDWNHTAQNDGYAAQCHKNGVMRLPQGKCLGGTSCFNYMFYNRGSKYDYDSWAEIAK
DSTWNWDNVVPYFIKSENLLDNDILKSPDGTLHGTKGYINVTRELSDRALEYLKALEEVG
ESSVEDVNGQEFIGYTQPMLTLSGGVRQSTSVCYITPAKDRENLKFMKNSLVSKITIDEN
GRARGVEIITKDNKKISAYAKNEIIVTAGVINSPKLLMLSGIGPKRHLKSLNIKVNSDLP
VGRNLQDHNLVPLYIEMEESKEPVIPRNPHKHPFDMVTGFASLNKDKPYYADYQTQIFIV
PHGSQMPVQYFTNDFMYEEDVSERLNEGSNRGNAAVALIVNLHPKSKGQILLKTTDPNDS
PLIYSGIFSNRRDLDNTVKYVKDFVKVMNSEHFKKNNASVVDLSNKRCGPFDLNSTVFWE
CYSRCMTNIAFDMIGTCAISKVVDSQLKVIGVDGLRVADASVIPLPIGANLYAPVVMVAE
KVSDMIKNEYQSQNK